Gene Tmz1t_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0547 
Symbol 
ID7085161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp616238 
End bp616873 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content77% 
IMG OID643697574 
ProductTPR repeat-containing protein 
Protein accessionYP_002354216 
Protein GI217968982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.980165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCC CCGAACCACT TCTGCCGAGC TGCCTGCAGC CACGCCGCGT GATCCTCTTC 
AGCGGCCACA TGATCGATGC GCCCGGCCGT GCCGAACCGC GCTTCCCGCC CGCACTCGCG 
CCCGCGGCGG CGGCGCGCAT CGCCGAAGCG CTCGATCGCC TGGAGGCCGG CCCGCTCGAC 
CTCGGCCTCA CCCAGGGCGC GGCGGGCGGC GACCTGCTCT TCGCCGAGGC GGCGCAGGCG 
CGCGCGCTGC CGCTGCTCTT CCTGCAGCCC TTCGGCGAGG ACGAGTTCAT CGCGCGCTCG 
GTACGCCCGG TGAGCGCGGG CGAGCAGTGG GTGGCGCGCT ACCGCGCGGT GGCCGCCCGC 
CTCGCCAGCC CGCCGCACGC CATGCCGCCC GCCCCCGCGG CCGCGGCCGA CAACCCCTTC 
GAGCGCTGCA ACCGCTGGCT GCTCGACACC GCGCTCGCCT GCGGCGGCGA ACGCGTCTGG 
CTGCTGTGCC TGTGGGACGG GCGCCGCGGC GACGGCGCCG GGGGCACCGC GCATATGGTC 
GAGGAGGTAA GCCGCCACCG CGGCCACGTC CTCCACATCG ACACCCGCGA GCTGCGACCG 
CACGATCCGG CTGGCAGCCC CCCGCTGCCG GACTAG
 
Protein sequence
MPAPEPLLPS CLQPRRVILF SGHMIDAPGR AEPRFPPALA PAAAARIAEA LDRLEAGPLD 
LGLTQGAAGG DLLFAEAAQA RALPLLFLQP FGEDEFIARS VRPVSAGEQW VARYRAVAAR 
LASPPHAMPP APAAAADNPF ERCNRWLLDT ALACGGERVW LLCLWDGRRG DGAGGTAHMV 
EEVSRHRGHV LHIDTRELRP HDPAGSPPLP D