Gene Tmz1t_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0542 
Symbol 
ID7085156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp610833 
End bp612227 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content69% 
IMG OID643697569 
ProductD-lactate dehydrogenase (cytochrome) 
Protein accessionYP_002354211 
Protein GI217968977 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAC TGAATGCCTC TTCCGCTGCC GCGCTGGAAG CCCTGACCGC CGTTTTCGGC 
GCCGACGTGC TCCCCGGCGA TGCCAGTCCG AAGTACCTGC AGGACTGGAG CGGCTGCGCC
GGCGGCCAGC CGCTGGCGAT CCTGCGCCCG CGCAGCACCG ACGAACTGTC GCGCATGCTG
GCGATCTGCC ACGCCCACGG CCAGGCGGTG GTGCCGCAGG GCGGCCTCAC CGGCCTGTGT
GGCGGCGCGG TGCCGGCCGG CGGCGAGGTG GTGGTGTCGC TCGAGCGCAT GAACCGCATC
GAGCGCATCG ACATCGATTC GGGCACCGTC ATCGTCGAGG CCGGCGCGAT CCTGCAGACG
GTGCAGGAAG CCTGCCGCGA CGCCGGCGCG CTGCTCGCGG TCGACCTCGG CGCGCGCGGC
TCCTGCCAGG TGGGCGGCAA CGTGTCGACC AACGCGGGCG GCAACCGGGT GATCCGCTAC
GGCAACACCC GCGACCTGGT GCTCGGGCTC GAGGTGGTGC TCGCCGACGG CACGGTGTTG
AGCATGCTCA ACCAGATGGT CAAGAACAAC GCCGGCATGG ACCTCAAGCA TCTCTTCATC
GGCAGCGAGG GCGTGCTCGG CATCGTCACC AGGGTGGTGT TCAAGCTGCA GCCGCTGCCC
AAGGGCGTGA GCACCGCGGT GGTCGCACTG CACGACTACC CCGCCGCGCT GCGCTTCCTG
CGCCATGCGC AGCAGAGCCT GTCCGGACAG GTCAGCGCCT TCGAGATCAT GTGGAACGAC
TACCTGGTCA CCGCCGTCGC TGCCGGCAAG CTGCGCGCGC CGCTCGACAC GAACTATCCG
GTGTACGTGC TGATCGACAT GCACTGCGGC CAGCCGGAGA CCGACGCCGG GCGCTTCGAG
GCGATGCTGG AACAGGCCAT CGAGGCGGGC TGGATCCTCG ACGGCGCGGT GGCGCAGTCG
GTGGCCGAGG CCGAAGCCTT CTGGGCGATC CGCGATGGCG TCGCCGAAGT GCTGCGCGAC
TATGCGCCGA CGCTCAACTT CGACGTCTCG GTGCCGATCG CGCAGATCGG CGAGTGCGCA
GCGCGCATCC GCACCGAGCT CGACCGCGAC TGGCCGGCGC TCAAGGCGCT GTTCTTCGGC
CACGTCGGCG ACGGCAACCT GCATGTGGTG GTGTGCAAGG TGCCGAGCGA CCACGACAGC
CAGATGCGCA TCGAGGACGC GGTGTATTCG GTGGTGCGCA GCTACGGCGG CTCGATCTCG
GCCGAGCACG GCATCGGCAC GCTCAAGCGC GACTGGCTGC ACTACTCGCG CAGCGAGGCC
GAGCTGGCGC TGATGCGGAC CTTGAAGCAC ACCCTGGATC CGAAGAACAT CCTCAATCCA
GGCAAGCTGA TCTGA
 
Protein sequence
MTALNASSAA ALEALTAVFG ADVLPGDASP KYLQDWSGCA GGQPLAILRP RSTDELSRML 
AICHAHGQAV VPQGGLTGLC GGAVPAGGEV VVSLERMNRI ERIDIDSGTV IVEAGAILQT
VQEACRDAGA LLAVDLGARG SCQVGGNVST NAGGNRVIRY GNTRDLVLGL EVVLADGTVL
SMLNQMVKNN AGMDLKHLFI GSEGVLGIVT RVVFKLQPLP KGVSTAVVAL HDYPAALRFL
RHAQQSLSGQ VSAFEIMWND YLVTAVAAGK LRAPLDTNYP VYVLIDMHCG QPETDAGRFE
AMLEQAIEAG WILDGAVAQS VAEAEAFWAI RDGVAEVLRD YAPTLNFDVS VPIAQIGECA
ARIRTELDRD WPALKALFFG HVGDGNLHVV VCKVPSDHDS QMRIEDAVYS VVRSYGGSIS
AEHGIGTLKR DWLHYSRSEA ELALMRTLKH TLDPKNILNP GKLI