| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0532 |
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| Symbol | |
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| ID | 7085146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 598997 |
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| End bp | 601441 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643697559 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002354201 |
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| Protein GI | 217968967 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.202889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG ACAACGCTCG CCTGAGGGCG GCCATCGACA CGCTGCGCGT CCCGATCTAC
ATGAAGGATG CGGACGGGCG CTATGTCTAC GCCAACGATC TCGCGTGCTC GCTGCTGAAA
CGCTCGCGTG ACGATGTCGT CGGCCGCTGC GACCAGGATC TTTTTCCGCC GGATCAGGCC
GAGGTCCTGC GCCGCAACGA CCTGCAGGTC ATCGCGACCG CCAGGGCGGT GGTCATCGAG
GAATATCTGA GCTTTCCCGA CGCGCCCGTG CCGCGCTGCT GCATGAACAT CAAGCAGCCG
GTCGTCGACG CCGGCGGCCG CCCGGTCGGC GTGATCGGCC TTGCCATCGA CATCGAGGCG
CGCAAGCAGC AGGAGCGGGA GCTGGTCGGC CTCAAGAACG ACTATGCCGC GATCCTCCAG
GCCCTGCCCG ATCCCTTGTT CGAGTTCGAC ATCGAAGGCC GCTGCCACGG CTACCGCACT
CCCGACGAGG ATCTGCTCGC CGCGCCGCCC GAAGTGTTCC TGGGGCGCAC CGTGCGCGAG
GTGCTGCCGC CGGAAGAGGC CGAGGTCTGT CTCGAGGCCC TGCGCGAGGC GGCGGCGAAG
GGGCGCTCCA CGGGCAAGGT GTTCAAGGTG GAGGCGCCCC AGGGCACGCG CTGGTTCGAG
CTCTCGGTGG CGCCGATGGC CAGCGCGGCG GGCCGGACGC AGCGCTTCAA CGTGCTTTCG
CGCGAGGTGA CCGCCCGCGA GCGCATGGAG CGCGCGCTGC AGGAGCAGGA GTCGCTGCTG
CGCGCCGTGG TGGACAACAC CCCGGTGGAA TACTGGGCGC GCGACCTCGA CGGGCGCTGC
ACCCTGCAGA ACGCGATGAC GGTGGCGCAC TGGGGCGACC TGCTCGGCCA GCGTCCGGAA
GAGAGCGCGA AGGAACCCGC GGCACGGACC GAGTGGCTGG AGACCAACCG CCGTGCCTAC
GCCGGCGAGA CCGTCCATCG CGAGGTCGAG TACGAGGTCG ACGGCGAGAC GCGCATCTTC
CAGTGCCTGG TCGCGCCGAT CCGCGTGGGC GGCGAGGTGG TGGGCATCTT CGGTTTCAAC
CAGGACATCA CCGAGCGCAA GCGCCAGGAG CACCAGATCC ACGAGCTCGC CTTCTTCGAT
CCGCTGACCC GGCTGCCCAA CCGGCGTCTG ATGTTCGACC GCCTGGAGCG GGCCTTGGGC
AGCAGTGCGC GTCGCCGGCA CCAGGGCGCG CTGCTGCTGA TCGACCTCGA CCACTTCAAG
GAGCTCAACG ATTCCCACGG CCACGAGGCC GGAGACCAGC TGCTGATGAA GGTCGCCGCG
CGCCTCGGGC TGAGCATCCG CGAGGGCGAC ACGGCCGCGC GCCTGGGGGG CGACGAGTTC
GTGGTGATCC TGGAGGATCT CGAGGACGTC GCCGACGAGC TCCTGCACAT CAAGGCGGTC
GCGGACCGCA TCGGCCGGGA GCTCGGCCGA CCCTTCCAGC TGCAGCGCGG CACGGCGGGC
GAGACGATCT CCTACCAGTG CTCGGCCAGC ATCGGCATCA GCGCCTTCGG CGAACCGGGC
GTCGGCGCGG CCGAGCTGCT GCGTCGTGCC GATACCGCGC TCTACCAGGC CAAGGCCGCG
GGGCGCAACG CGGTCAGCTT CTTCGACCCG ATCATGCAGG CCGCGGTCAC CGCGCGCGCG
CGCCTGCATT CCGACCTGCG CCAGGCGATC CGCGGAGGCC AGTTCGAGCT GCATTACCAG
GTCCAGGTGG ATGCGCAGCG ACGGCCCGCG GGCGCCGAGG CGCTGGTGCG CTGGCGTCAT
CCCGAGAAGG GGCTGATCCA CCCGGGCGGA TTCATCGACC TCGCCGAGGA AACCGGGCTG
ATCGTGCCGC TCGGCCACTG GGTGCTGGCG ACGGGGTGCC GGCAGCTCGC GCTGTGGGCC
CGCCACCCCG CGACCGCGCA CCTGCGGCTT GCGGTCAACG TGAGCGCGCG TCAGTTCCGT
CAGCCGTCCT TCGCCGACGA GGTGCGTGCG CTGCTCGAAC AGACCGGCGC GCCGGCGGAC
CGCCTCAAGC TCGAGCTGAC CGAGAGCAGC CTGATCGAGG ACACCGAGGC GGTGATCGAG
CGCATGGAGA CGCTGCGTGC GCTCGGCATC CGTTTCGCGC TCGACGACTT CGGCACCGGT
TACTCCTCGC TCGCCTATCT CAAGCGCCTG CCGCTGGCGC AGTTGAAGAT CGACCAGTCT
TTCGTGCGCG ACCTGATGTC CGATCCCAAC GATGCCAGCA TCGTGCGCAC CATCCTCGCC
CTCGGCGACA GCCTCGGCCT CGCCGTGATC GCCGAAGGGG TCGAGACCGA GGCGCAGTAT
GCCTTCCTGG CGGCGCACGG CTGCCGCGCC TACCAGGGCT ACCTGTTCGG GCAGCCGGTC
GCGCTGGACG TGTTCGAGGC CGGGCTGGCG GCGTCGGACG GCTGA
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| Protein sequence | MNDDNARLRA AIDTLRVPIY MKDADGRYVY ANDLACSLLK RSRDDVVGRC DQDLFPPDQA
EVLRRNDLQV IATARAVVIE EYLSFPDAPV PRCCMNIKQP VVDAGGRPVG VIGLAIDIEA
RKQQERELVG LKNDYAAILQ ALPDPLFEFD IEGRCHGYRT PDEDLLAAPP EVFLGRTVRE
VLPPEEAEVC LEALREAAAK GRSTGKVFKV EAPQGTRWFE LSVAPMASAA GRTQRFNVLS
REVTARERME RALQEQESLL RAVVDNTPVE YWARDLDGRC TLQNAMTVAH WGDLLGQRPE
ESAKEPAART EWLETNRRAY AGETVHREVE YEVDGETRIF QCLVAPIRVG GEVVGIFGFN
QDITERKRQE HQIHELAFFD PLTRLPNRRL MFDRLERALG SSARRRHQGA LLLIDLDHFK
ELNDSHGHEA GDQLLMKVAA RLGLSIREGD TAARLGGDEF VVILEDLEDV ADELLHIKAV
ADRIGRELGR PFQLQRGTAG ETISYQCSAS IGISAFGEPG VGAAELLRRA DTALYQAKAA
GRNAVSFFDP IMQAAVTARA RLHSDLRQAI RGGQFELHYQ VQVDAQRRPA GAEALVRWRH
PEKGLIHPGG FIDLAEETGL IVPLGHWVLA TGCRQLALWA RHPATAHLRL AVNVSARQFR
QPSFADEVRA LLEQTGAPAD RLKLELTESS LIEDTEAVIE RMETLRALGI RFALDDFGTG
YSSLAYLKRL PLAQLKIDQS FVRDLMSDPN DASIVRTILA LGDSLGLAVI AEGVETEAQY
AFLAAHGCRA YQGYLFGQPV ALDVFEAGLA ASDG
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