Gene Tmz1t_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0522 
Symbol 
ID7085136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp587238 
End bp587753 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID643697550 
Productputative transcriptional regulator 
Protein accessionYP_002354192 
Protein GI217968958 
COG category[K] Transcription 
COG ID[COG5631] Predicted transcription regulator, contains HTH domain (MarR family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAG CCAGCCGCAT CGTGTCCTCC CAGCACCTGA TCTCGCCGAA ATCGCCCGAA 
CTTTCCGAGA TGGAGTTCGG CCTCATCATC GCCTGGCATG CTTTCGCACG CTGGATGATG
CGCTGCATGA CCACCGCCGG CGTCAAGGAC ATGACGCCGA TCGACGTGCT GGTGCTGCAC
CACGTGTCGC ACCGCGACTC CGAGAAGCGC CTTGCGGACA TCTGCTTCGT GCTCAACGTC
GAGGACACCC ACGTCGTCTC CTACTCGCTG CGCAAGCTCG CCGGACTCGG CCTGGTGCAG
AGCGTCAAGA AGGGCAAGGA GGCGTTCTTC TCCGTCACCG AGCGGGGCCG CGAGATCTGC
CTGGCGTACC GCGACGTACG CGAGGCCTGC CTGATGCCCG GCTTCACCGG CAGCCCCGAG
GACAACGCCC AGATCGGCGA ACTCGCCCGC CTGCTGCGCA CCCTGTCCGG CCGCTACGAC
CAGGCCGCGC GCGCGGCCTC CACTTCATCG CTGTAA
 
Protein sequence
MKEASRIVSS QHLISPKSPE LSEMEFGLII AWHAFARWMM RCMTTAGVKD MTPIDVLVLH 
HVSHRDSEKR LADICFVLNV EDTHVVSYSL RKLAGLGLVQ SVKKGKEAFF SVTERGREIC
LAYRDVREAC LMPGFTGSPE DNAQIGELAR LLRTLSGRYD QAARAASTSS L