| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0505 |
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| Symbol | |
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| ID | 7085016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 567151 |
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| End bp | 570306 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643697533 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002354175 |
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| Protein GI | 217968941 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.187639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGTT TCTTCATCGA CCGACCCATC TTCGCGTGGG TCATCGCCAT CGTCATCATG
CTGGGGGGCG CGCTGTCCAT CCGGCAGCTG CCGGTGTCCC AGTACCCGTC GATCGCACCG
CCCGCGATCG TCATCAACGC CAAGTACCCC GGTGCCTCCG CCAAGGCGGT GGAAGACTCG
GTGACGCAGA TCATCGAGCA GAAGCTCACC GGCCTCGACG GCCTGCTGTA CATGAAGTCG
ACCAGCGACG CCTACGGCAA CGCCTCGACC ACGCTGACCT TCTCCGCCGA CACCGACCCC
GACATCGCCC AGGTGCAGGT GCAGAACAAG ATGCAGACCG CGCTGCCGCT GCTGCCGCAG
GCCGTGCAGC AGCAGGGGGT GACGGTCGCC AAGTCGGCGA TGAACTTCCT GATGGTGGTC
GGCTTCGTGT CCGCGGACGG CAGCATGGAC GGCACCGACC TGTCCGACTT CCTCGTGTCC
TCGGTGCAGG ATCCGCTGTC GCGCGTCGAT GGTGTCGGCG AGGTGCAGGT CTTCGGTGCG
CAATACGCCA TGCGGGTGTG GATCGATCCG GCCAGGCTGA CCAACTACCG CCTCACCCCG
GGTGACGTGC GCACGGCGTT GATGGCGCAG AACACCCAGG TGTCCGCGGG CCAGCTCGGC
GGCGCGCCGG CGGTGCCCGG TCAGGGCTTC ACCGCCACCA TCACCGCGCA GAGCCGGCTG
CAGACCGTCG CCGAGTTCGA GGACATCCTG CTGCGCAGCA GCCAGCAGGG CGGCGAGGTG
CGCCTGAAGG ACGTCGCGCG CATCGAGATC GGCGCCGAGA ACTACGGCAC CGTCGCCCGC
TTCAACGGCC AGCCCGCTGC GGGTGTCGGC ATCCGTCTCG CCTCGGGCGC CAACGCGCTC
GACACCGCGA CCGCGGTGCG CGCCAGGCTC GACGAGATGA AGCGCTATTT CCCCGAAGGC
GTGCAGTACG TCGTGCCCTA CGACACCACG CCCTTCGTGA AGATCTCCAT CGAATCGGTG
GTGATGACGC TGATCGAGGC GGTGGCGCTG GTCTTCCTGG TGATGTACCT GTTCCTGCAG
AACTTCCGCG CCACGCTGAT CCCGACCATG GCGATCCCGG TGGTGCTGCT CGGCACCTTC
GGCCTGATGG CGGCCTTCGG CTTCTCGATC AACACGCTGA CCATGTTCGG CATGGTGCTG
GCGATCGGCC TGCTGGTGGA CGACGCCATC GTGGTGGTCG AGAACGTCGA GCGTGTGATG
ACCGAAGAAG GCCTGCCGCC CAAGGAGGCC ACCAAGCGCT CGATGGACCA GATCACCAGC
GCGCTGGTCG GCATCGGCCT GGTGCTGTCC GCGGTGTTCG TGCCGATGGC CTTCTTCGGC
GGCTCGACCG GCGTGATCTA CCGCCAGTTC TCGATCACCA TCGTGTCGGC GATGGCGCTG
TCGGTGCTGG TGGCGATCGT GTTCACCCCC GCCCTGTGCG CGAGCATCCT GAAGCCGGTG
GAGAAGGGTC ACGAGCATGG CGAAGGCGGC CTGTTCGGCA GGTTCTTCCA CTGGTTCAAC
GTCAAGTTCG AGCGCAGCAC CAAGGGCTAC GAGTCGGCGG TCGGCGGCAT CCTCGGGCGC
AGCGTGCGCT TCCTCGCCAT CTACCTCGCC ATCGTCGCGG TGCTCGGCCT GCTCTTCGTG
CGCATGCCGA CCTCCTTCCT GCCCGAGGAA GACCAGGGCG TGATGTTCAA CCAGATCATG
CTGCCCGCCG GCGCCACCCA GGAGCGCACC CTCGCGGTGC TCGAGAAGGT CGAGCACCAC
TTCCTCGAGA ACGAGAAGGA CACCGTGCGC GCGATCTTCA CCGTCGCCGG CTTCAGCTTC
GGCGGCAGCG GCCAGCACAT GGGCATCGGC TTCGTGAACC TGAAGCACTG GGACGAACGC
AAGGCGCCGG GCAAGGACGT CAAGTCGGTG GCCGGGCGTG CCATGGGCGC GTTCGCGCAG
ATCCGCGAGG CCATGGTGTT CGCCTTCGTG CCGCCGGCGG TGATCGAGCT CGGCACCTCG
GGCGGCTTCA CCGTGCAGAT GCAGGACCGC TCCGGCCTCG GCCATGACGC CCTGCTCGCC
GCGCGCAACC AGTTCCTCGG CATGGCGGCG CAGGACAAGC GCCTGGTCGG TGTGCGGCCC
AACGGCCAGG AGGACATGCC CGAACTCAAG CTCGACATCG ACCACGCCAA GGCCGGCGCG
CTCGGCCTCT CGGTCGCCGA CATCAACGAC ACCTTGTCGA CCGCCTGGGG CGGCAGCTAC
ATCAACGACT TCCTCGACCG CGGCCGCATC AAGAAGGTGT ACCTGCAGGG CGACGCGGGC
TCGCGCATGA CGCCCGAGGA CCTCGACAAG TGGTACGTGC GCAACAAGGC GGGCGACATG
GTGCCGTTCT CGGCCTTCGC CACCGCGCAC TGGACCTACG GCTCGCCGCG CCTGGAGCGC
TTCAACGGCC AGCCCTCCAT GGAGCTGCTC GGACAGGCCG CGCCCGGCTT GTCCTCCGGC
GAGGCGATGC AGGCGGTCGA GGAGATCATG GCCAAACTGC CGCCGGGTAT CGGCTACGAC
TGGTCGGGCA CCTCGTACGA GGAGCGCCGT TCCGGCTCGC AGGCGCCTGC GCTGTATGCG
CTCTCGCTGC TGGTGGTGTT CCTGTGCCTG GCGGCGCTGT ACGAGAGCTG GTCGGTGCCC
TTCGCGGTGA TGCTGGTGGT GCCGCTCGGC GTGCTCGGCG CGCTGCTCGC CGCCAGCGGG
CGAGGGCTGT CGAACGACGT GTATTTCCAG GTCGGCCTGC TCGCCACCAT CGGCCTGTCG
TCGAAGAACG CGATCCTGAT CGTGGAGTTC GCCAAGGCGC AGATGGAGGA GGGCAAGGAT
CTGATCTCCG CCACGCTGAC CGCGGTGCGC ATGCGGCTGC GCCCGATCAT CATGACCTCG
CTCGCCTTCG GCTTCGGCGT GCTGCCGCTG GCGATCGCCA CCGGCGCCGG CGCCGGCAGC
CAGAACGCGA TCGGCACCGG CGTGCTCGGC GGCACCATCG GCGCGACGCT GCTCGGCCTC
TTCTTCGTGC CGCTGTTCTA CGTCGTGATC AAGCGCATTT TCCCGGACAA GCCCAAGGGT
GAGGCCGTGG CGCCGATCGC CCAGGAGGGA CGTTGA
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| Protein sequence | MARFFIDRPI FAWVIAIVIM LGGALSIRQL PVSQYPSIAP PAIVINAKYP GASAKAVEDS
VTQIIEQKLT GLDGLLYMKS TSDAYGNAST TLTFSADTDP DIAQVQVQNK MQTALPLLPQ
AVQQQGVTVA KSAMNFLMVV GFVSADGSMD GTDLSDFLVS SVQDPLSRVD GVGEVQVFGA
QYAMRVWIDP ARLTNYRLTP GDVRTALMAQ NTQVSAGQLG GAPAVPGQGF TATITAQSRL
QTVAEFEDIL LRSSQQGGEV RLKDVARIEI GAENYGTVAR FNGQPAAGVG IRLASGANAL
DTATAVRARL DEMKRYFPEG VQYVVPYDTT PFVKISIESV VMTLIEAVAL VFLVMYLFLQ
NFRATLIPTM AIPVVLLGTF GLMAAFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
TEEGLPPKEA TKRSMDQITS ALVGIGLVLS AVFVPMAFFG GSTGVIYRQF SITIVSAMAL
SVLVAIVFTP ALCASILKPV EKGHEHGEGG LFGRFFHWFN VKFERSTKGY ESAVGGILGR
SVRFLAIYLA IVAVLGLLFV RMPTSFLPEE DQGVMFNQIM LPAGATQERT LAVLEKVEHH
FLENEKDTVR AIFTVAGFSF GGSGQHMGIG FVNLKHWDER KAPGKDVKSV AGRAMGAFAQ
IREAMVFAFV PPAVIELGTS GGFTVQMQDR SGLGHDALLA ARNQFLGMAA QDKRLVGVRP
NGQEDMPELK LDIDHAKAGA LGLSVADIND TLSTAWGGSY INDFLDRGRI KKVYLQGDAG
SRMTPEDLDK WYVRNKAGDM VPFSAFATAH WTYGSPRLER FNGQPSMELL GQAAPGLSSG
EAMQAVEEIM AKLPPGIGYD WSGTSYEERR SGSQAPALYA LSLLVVFLCL AALYESWSVP
FAVMLVVPLG VLGALLAASG RGLSNDVYFQ VGLLATIGLS SKNAILIVEF AKAQMEEGKD
LISATLTAVR MRLRPIIMTS LAFGFGVLPL AIATGAGAGS QNAIGTGVLG GTIGATLLGL
FFVPLFYVVI KRIFPDKPKG EAVAPIAQEG R
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