| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0504 |
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| Symbol | |
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| ID | 7085015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 565940 |
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| End bp | 567139 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643697532 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002354174 |
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| Protein GI | 217968940 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.196433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAA GCTCCCAACC CCTTTTCAGG TCCGCGGCTG CGGTGGCGCT GAGCGCCCTG
GTCCTGGCCG CCTGCAGCGG AGGCAAGGAA CAACAGGGTG GCGCGCCGGG CGCCGGGGCG
CCGCTGCAGG CGCCGGCGGT GACCGTGATG ACGGTCGCCA GCGGCAGCGT GCCGATGGTG
ACCGAGCTGC CCGGCCGCAC CACGCCCTAT CTGATCGCCG AGCTGCGCCC GCAAGTCACC
GGCATCCTCA CCCAGCGCGC CTTCGACGAG GGCAGCGAGG TCAAGGCCGG GCAGGTGCTC
TACCGCATCG ACGACGCCCC CTACCAGGCT GCCCACGACA GCGCCAAGGC GGCGCTCGCC
CGTGCCGAGG CCAATGCCCA GGTCGCGCGC ATCAAGGCCG AACGCCACGC CGGGCTGGTC
AAGATCGACG CTGTCAGCAA GCAGGCCAAC GACGACACCC AGGCCGCGCT GAAGCAGGCC
CAGGCCGAGG TCGCCGCGGC GAAGGCGGCG CTCGACAAGG CGCGCATCGA CCTCGACTAC
ACCCGCCTCA AGTCGCCGAT CTCCGGGCGC ATCGGACGCT CGGCGGTGAC GCCGGGCGCG
CTGGTCACCG CCAACCAGAC GCAGGCGCTC GCCACCGTGC AGCAGCTCGA CCCGATCTAC
GTCGACCTCA CCCAGTCCAG CGCCGACATG CTGCGCATGC GCGCGGAGAT CGCCGCCGGC
CGCATGCAGA CGGGCGCCAA GGGCGAGGTG CCGGTGAAGC TGATCCTCGA GGATGGCAGC
GAATACGCCG TCGAGGGCCG CCTGGCCTTG TCGGAGGTGA CGGTGGACGA AGGCACCGGC
AGCGTCACCC TGCGCGCGAA GTTCTCCAAC GCGGACGGCG TGCTGCTGCC GGGCATGTAC
GTGCGCGCCC GCCTGCCGCA GGGTACGCGC AGCGACGCGA TCCTGGTGCC GCACAAGGCG
CTCAGCCGCG ACCCGCTCGG CAACGCGCTG GTGATGGTGG TGAACGCCGA GAGCAAGGTC
GAGGCGCGCC CGGTGAAGGT GGCGCAATCG CTCGGCTCGG ACTGGGTGGT GACCGGCGGC
CTCGCAGCCG GCGAGCGCAT CATCGTCGAA GGCCTGCAGA AGGCCCGCCC GGGCGCGCCG
GTGCAGGCGC AGGAGGCCGG CGCCCAGCCC GCCGCCGCAC CCGCGGCCAC GGCCAGCTGA
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| Protein sequence | MKTSSQPLFR SAAAVALSAL VLAACSGGKE QQGGAPGAGA PLQAPAVTVM TVASGSVPMV
TELPGRTTPY LIAELRPQVT GILTQRAFDE GSEVKAGQVL YRIDDAPYQA AHDSAKAALA
RAEANAQVAR IKAERHAGLV KIDAVSKQAN DDTQAALKQA QAEVAAAKAA LDKARIDLDY
TRLKSPISGR IGRSAVTPGA LVTANQTQAL ATVQQLDPIY VDLTQSSADM LRMRAEIAAG
RMQTGAKGEV PVKLILEDGS EYAVEGRLAL SEVTVDEGTG SVTLRAKFSN ADGVLLPGMY
VRARLPQGTR SDAILVPHKA LSRDPLGNAL VMVVNAESKV EARPVKVAQS LGSDWVVTGG
LAAGERIIVE GLQKARPGAP VQAQEAGAQP AAAPAATAS
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