| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0500 |
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| Symbol | |
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| ID | 7085011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 561532 |
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| End bp | 562815 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643697529 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002354171 |
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| Protein GI | 217968937 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGCA GCGTGCTCAT CGGCCTTTTC CTGCTCGCCC TGCTCGCGGG CATGCCGCTT
GCCACCGGCC TGGGCGTGGC CAGCATCGCC GTGCTCGCGA TGGCCGGCTT CGACCAGCTC
GCGGTGCCGA CCAACATCTA CGCCGGCATC GCCAAGTACC CGCTGCTGGC GATCCCGATG
TTCATCCTCG CCGGCATGAT CTTCGAGCGC TCCGGCGTGG CCATCCGCCT GGTGCGCTTC
GTCACCGCGA TCGTGGGCGA ATGGACGGGC TCGCTGGCGG TGGTGGCGGT GCTGGTGTCG
ATGCTGCTCG GCGGCATCTC CGGTTCGGGC CCGGCCGATG CGGCCGCCGT GGCGGCGGTG
ATGCTGCCGT CGATGATCGC GCGCGGCTAT CCGAAGGGCT TCTCGGCCGG CCTGATCGCC
GCCTCGGGTT CGACCGCGAT CGTGATCCCG CCCTCGGTGG CCTTCATCGT CTACAGCGTG
ATGGTGCCGG CGGCGACCGT GCCGGCGCTG TTCGCCGCCG GCCTGTTCCC TGGCATCGTC
GCCGCACTGT GCCTGCTCGT GCCGGCGATC GTGATCAGCC GCAAGTACGG CTTCGGCCGC
GACTACAAGG CCGCGCGCCC GCCGCTCGGC AAGAGCTTCA TCGAGGCGAT CTGGGGCCTG
CTGGCGCCGG TGATCATCCT CGGCGGCCTG CGCACCGGCA TCTTCACGCC CACTGAGGCG
GCGGTGGTGG CGGTGGCCTA CGGCATCTTC GTCGGCATGG TGGTGTATCG CAGCATCAGC
TTCAGAGGCC TGTTCCGCGT GCTGGTCGAG GCCGGCGAGC TGTCGGCGGT GGTGCTGATG
ATCATCGGCA TCGCCTCGGT ATTCGCCTGG GCGGGCAACA CGCTGGGCAT CTTCGACGCC
GCGGCGAAGG CGCTGGTCGG CCTGCACTCC AGTGAATGGC TGATGCTGCT GTCGATCAAC
CTGCTGCTGC TCGCGGCGGG GATGTTCCTC GACGCGATCT CGATCTTCCT GATCCTGCTG
CCGCTGCTGG TGCCGATCGC GGTGGCGATG GGCTGGGACC TGGTGTGGTT CGGGGTGATG
ATGACGATCA ACCTCGCCAT CGGCCAGTTC ACCCCGCCGA TGGCGATCTC CCTGATGATC
ACCTCGCGCA TCGCCGGGAT CGGCATGGAG GAGACCTTCA AGTGGGTGAT CTGGCTGGTG
CTGGCGATGG GTGCCGGGCT GACGCTGATG ATCGTGTTCC CGCAGCTCGC GCTGTGGCTG
CCGGGGAAGC TCGGCTACCT GTAA
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| Protein sequence | MIGSVLIGLF LLALLAGMPL ATGLGVASIA VLAMAGFDQL AVPTNIYAGI AKYPLLAIPM
FILAGMIFER SGVAIRLVRF VTAIVGEWTG SLAVVAVLVS MLLGGISGSG PADAAAVAAV
MLPSMIARGY PKGFSAGLIA ASGSTAIVIP PSVAFIVYSV MVPAATVPAL FAAGLFPGIV
AALCLLVPAI VISRKYGFGR DYKAARPPLG KSFIEAIWGL LAPVIILGGL RTGIFTPTEA
AVVAVAYGIF VGMVVYRSIS FRGLFRVLVE AGELSAVVLM IIGIASVFAW AGNTLGIFDA
AAKALVGLHS SEWLMLLSIN LLLLAAGMFL DAISIFLILL PLLVPIAVAM GWDLVWFGVM
MTINLAIGQF TPPMAISLMI TSRIAGIGME ETFKWVIWLV LAMGAGLTLM IVFPQLALWL
PGKLGYL
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