| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0488 |
|---|
| Symbol | |
|---|
| ID | 7084999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 550400 |
|---|
| End bp | 551353 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643697517 |
|---|
| Product | restriction endonuclease |
|---|
| Protein accession | YP_002354159 |
|---|
| Protein GI | 217968925 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1715] Restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCC CTTACCGCAA GTCCCGCCGC GATCCGGGCC TGATCGAGAT CGCCGCCACG
TCCGACTGGA AGGTCTCTGC CGCCATGGCG GCCGTGTGCG TCCTTGCCGC CACCGTCATC
ATCCCCGCCC TGCTCGGCAG CAGCCGCGTG CTCGACAGTC TGGTGCTGAT CTTCGTACCG
CTGGCCTGGC TGATGGCCGT CGTCTTCGGC GGCATCTCGC TGATCCGCTT GCTGCGGCAG
CGCCCGCAGG ACTCGCCAGT GCCGCCGCGC TCGCCCACGA ACCGCCCGGC ACAAGCGGCA
GCGCGCGCGA CCGAAGCCTC GTTGCCGGAA GTCGACAAGG CCCCGCTTGC GGAATCATTC
GCCCCCCCGA CCAGCGCCGC AGCGCCCGAG GCCCGGCCCA CCGCGTGGTC GCGCGAGCTC
ATCGACCGCA TCGAGTGGAA GCGCTTCGAA GACCTGTGCT GCGAGTTCTA TCGGGTGAAA
GGCATCCGCG CCGAAACCAC CCGGCTCGGC GCCGACGGCG GCGTCGACAT CCGCCTGTTC
CAGGACGCCG CCGATCCCCA GCGTTGCACG GCCGTCGTCC AGTGCAAGGC CTGGAACCAG
GCCGTCGGCG TAAAGCCGGT GCGGGAACTG CGGGGTGTGA TGGCGCACGA GCGCGTCGAC
AAGGCCTTCT TCATGGCCCC GAACGGCTTC ACCGACGAGG CCCGCAGCTT CGCCGCGGAG
AACCGCATCA CCCTGCTCGA CGGCAAACTG TTCCTCGCCA TGCTCGAGCG CTTGCCCGCA
GCCCTGCGTC GACAACTGCT CGACTTCGCG ACGGAAGGCG ACTGGACGAC GCCCACCTGC
CCGTCCTGCG GGGTGAAGAT GGCTGCGCGC GACGGCACGC ACGGGCGATT CTGGGGCTGT
GTCCGTTTCC CGAAATGCCG CGCGACGCTG CAGATGCGCG GATCAGCCGT CTGA
|
|---|
| Protein sequence | MPRPYRKSRR DPGLIEIAAT SDWKVSAAMA AVCVLAATVI IPALLGSSRV LDSLVLIFVP
LAWLMAVVFG GISLIRLLRQ RPQDSPVPPR SPTNRPAQAA ARATEASLPE VDKAPLAESF
APPTSAAAPE ARPTAWSREL IDRIEWKRFE DLCCEFYRVK GIRAETTRLG ADGGVDIRLF
QDAADPQRCT AVVQCKAWNQ AVGVKPVREL RGVMAHERVD KAFFMAPNGF TDEARSFAAE
NRITLLDGKL FLAMLERLPA ALRRQLLDFA TEGDWTTPTC PSCGVKMAAR DGTHGRFWGC
VRFPKCRATL QMRGSAV
|
|---|
| |