| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0452 |
|---|
| Symbol | |
|---|
| ID | 7084962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 514867 |
|---|
| End bp | 516210 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643697484 |
|---|
| Product | glutamate dehydrogenase |
|---|
| Protein accession | YP_002354127 |
|---|
| Protein GI | 217968893 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATC AGTCCCTCGA GGAGTTCCTG GCCTACGTCG AACAGCGCAA CCCCGGCCAG
CCCGAGTTTC TGCAGGCCGT GACCGAGGTC ATGGAGAGCC TGTGGCCCTT CATCTCGGCC
AACAAGCGCT ATGCGGAGCA CTCCCTCCTC GACCGGCTGA TCGAGCCCGA GCGCGCGATC
TCCTTCCGCG TCTCTTGGGT GGACGACCGT GGCGAGGTGC AGGTCAACCG CGGCTACCGC
ATCCAGCACA GCTCCGCGAT CGGCCCCTAC AAGGGCGGCC TGCGCTTCCA CCCCTCGGTG
AACCTGTCGA TCCTGAAATT CCTCGCCTTC GAGCAGACCT TCAAGAACGC GCTCACCACG
CTGCCGATGG GCGGTGGCAA GGGCGGCTCC GACTTCGATC CCAAGGGCCG CAGCCCGGGT
GAGGTCATGC GCTTCTGCCA GGCCTTCATG ACCGAGCTGT ACCGTCACGT CGGTCCCGAC
ACCGACGTGC CCGCCGGCGA CATCGGCGTG GGCGGCCGCG AGGTCGGCTT CATGGCCGGC
ATGATGAAGA AGCTGTCGAA CAACTCGGCC TGCGTGTTCA CCGGCAAGGG CCTGTCCTTC
GGCGGCTCGC TGATCCGTCC CGAGTCGACC GGCTACGGCA CGGTCTACTT CGCCAACGCC
ATGCTCGAGC GCGCCGGCCG CGACATCAAG GGCATGCGCG TCTCGGTGTC GGGCTCGGGC
AACGTCGCCC AGTACGCCAT CGAGAAGCTG ATGGAGCTCG GCGCCAAGCC GATCACCTGC
TCCGACTCGA GCGGCACCGT GATCGACGAG GCCGGCTTCA CCCCCGAGAA GCTGGCGATC
CTCATGGAGA TCAAGAACCA CTACTACGGC CGCGCCTCCG AATACGCCGA ACGCGTCGGC
GCCCGCTTCG AGCCGGGTGT GCGTCCGTGG CATGTGCCGG TGGAAGTCGC GCTGCCGTGC
GCGACCCAGA ACGAGCTCGA CGGCAACGAC GCCGCCACCC TGGTCAAGAA CGGCGTGATC
GCGGTCGCCG AGGGCGCCAA CATGCCCAGC ACCATGGAAG CCGCGAAGAT CTTCGAGCAC
AACGGCGTGC TGTATGCGCC GGGCAAGGCC TCCAACGCCG GCGGTGTGGC GACCTCGGGC
CTGGAGATGA GCCAGAACGC GATGCGCCTG TCGTGGACCC GCGAGGAGGT CGACGCCCGC
CTCAAGGAGA TCATGCTCGG CATCCACGCC GCCTGCCTGA AGTACGGCGA GCGCGAGGAC
GGCACGGTGA GCTACGTCGA CGGCGCCAAC GTCGCCGGCT TCGTCAAGGT CGCCGAGGCC
ATGCTGGCGC AAGGCGTGAT CTGA
|
|---|
| Protein sequence | MKYQSLEEFL AYVEQRNPGQ PEFLQAVTEV MESLWPFISA NKRYAEHSLL DRLIEPERAI
SFRVSWVDDR GEVQVNRGYR IQHSSAIGPY KGGLRFHPSV NLSILKFLAF EQTFKNALTT
LPMGGGKGGS DFDPKGRSPG EVMRFCQAFM TELYRHVGPD TDVPAGDIGV GGREVGFMAG
MMKKLSNNSA CVFTGKGLSF GGSLIRPEST GYGTVYFANA MLERAGRDIK GMRVSVSGSG
NVAQYAIEKL MELGAKPITC SDSSGTVIDE AGFTPEKLAI LMEIKNHYYG RASEYAERVG
ARFEPGVRPW HVPVEVALPC ATQNELDGND AATLVKNGVI AVAEGANMPS TMEAAKIFEH
NGVLYAPGKA SNAGGVATSG LEMSQNAMRL SWTREEVDAR LKEIMLGIHA ACLKYGERED
GTVSYVDGAN VAGFVKVAEA MLAQGVI
|
|---|
| |