| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0432 |
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| Symbol | |
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| ID | 7084942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 494212 |
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| End bp | 496245 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643697464 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_002354107 |
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| Protein GI | 217968873 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCCT CCGTCGATTC GCCTGTCGCC GTCGCCGGCA AGGGCATGCT GCGCGTCGTC
TTCTACAGCG CGATCCTGTT CTCGGTCTTC CAGCTCGTCA CCTCGGCCTT CAGCCCGCTG
TCGAGCACCG TCGTGCGCGC GCTGCACGTC GGTTTCCTGC TGCTGCTGAC CTTCCTGCTC
CATCCTGTGC AGGGCGGGCA GGGGCGCACC AGCCTGGCGA CCAAGGTCAT CGGCTTCGGC
GCGCTGCTGC TGTCGGGCTA TCACTGGATC TACGAGGCCG ACCTCGTGCA GCGTGCCGGT
GAGCTCACCC AGGCCGACAT GGTGGTGGGC GTCGTCACGC TGGTGCTGGT GTTCGAGGCT
GCGCGCCGCA TCATGGGGCT GGCGCTGCCG CTGATCTGTC TCGGCTTCCT CGCCTACGCC
CTGTTCGGCG AGTACCTCCC GGGCGAGCTC GCCCACCGCG GCTATGGGCT GGACCAGGTG
GTGGGCCAGC TCGCCTTCGG CACCGAGGGG ATCTACGGCA CGCCGACCTA CGTGTCCTCG
TCCTACATCT TCCTGTTCAT CCTGTTCGGC GCCTTCCTCG AGCAGGCGGG CATGATCGAC
CTGTTCACCA ACTTCGCCCT CGGCACCGTA GGCCACACCA AGGGCGGCCC GGCCAAGGTC
GCAGTGGTGT CGTCCGGCCT GATGGGCACG ATCAACGGCT CGGGGGTGGC CAATGTGGTC
ACCACCGGCC AGTTCACCAT CCCGCTGATG AAGAAGTTCG GCTACACGCC GGCCTTCGCC
GGCGCGGTCG AGGCCACCAG CTCGATGGGC GGGCAGATCA TGCCGCCGGT GATGGGTGCG
GTGGCCTTCA TCATGGCCGA GACGATCAAC GTGCCCTACG TCGAGATCGC CAAGGCGGCG
GCGATCCCCG CCATGCTGTA CTTCTTCACC GTGTTCTGGA TGGTCCACCT CGAGGCCGGC
CGCGCCGGGC TGAAGGGGCT GCCGAAGGAG GAGTGCCCCG ACCCGTGGGT GGCGATCCGC
GCGCGCTGGT ACCTGCTGCT GCCGCTCGTC GGCCTGGTCT ACCTGCTCTT CGCCGGCTTC
ACGCCGATGT TCGCCGGCAT GGTGGGCCTG GCGCTGACCG TGGTGCTGCT GTTCGGCAGC
AGCCTGGCGC GCCATCTCAA CGGCACCTCG CTGCGCCTGC TGTTCTGGAT CGTGCTCGGC
CTGGCCTGCT CGGCCTTCGC CAAGGTCGGG ATCATCTCGG TGGTCGCGGT GGTGGCGGTG
CTCGCGGTGC TGCTCGCGCC GCGCGCCGAT GGCCGCCACA CCCTGCGCCT GGCGGCGAGG
GCGCTGGTGG ACGGCGCGCT GCACGCGCTG CCGGTGGGCG TGGCCTGCGC GCTGGTGGGC
GTGATCATCG GCTCGCTGAC CCTGACCGGC GGCGCCACCG CCTTCGCCGG CTACATCATC
CAGATCGGCG ACGACAGCCT GTTCGTCTCG CTGCTGCTCA CCATGCTCAC CTGCCTGGTG
CTCGGGATGG GCATCCCGAC CATCCCGAAC TACATCATCA CCAGCTCGAT CGCCGCACCC
GCGCTGCTCG AGCTCGGCGT GCCGCTGATC GTCTCGCACA TGTTCGTGTT CTATTTCGGG
ATCATGGCCG ACCTCACCCC GCCGGTCGCG CTCGCCGCCT TCGCCGCGGC GCCGATCGCC
AAGGAGAGCG GGCTGAAGAT CGGCGTGCGC GCGGTACAGA TCGCCATCGC CGGCTTCATC
GTGCCCTACA TGGCGGTGTA TGCGCCCGAG CTCATGCTGC AGGGCGACAA GGGCTTCGAG
GCGACGCTGT ACGTGGTCTT CAAGGCCCTG CTCGCCGTCA CGCTGTGGGG TACGGCGGTG
GTCGGCTACT TCCGCTCGCC GATGAACCCG CTCGAGCGCG TGCTCGCCTT TGTCGCCGCG
TCCATGCTGG TGGTCGCGCT GCCGATCACC GACGAGCTCG GCTTCGGCCT GGCGGCGCTG
GTGCTGGGCT GGCATATCTG GCGCTCGCGC GACACACAGG CGCTCACCGT CTGA
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| Protein sequence | MSSSVDSPVA VAGKGMLRVV FYSAILFSVF QLVTSAFSPL SSTVVRALHV GFLLLLTFLL
HPVQGGQGRT SLATKVIGFG ALLLSGYHWI YEADLVQRAG ELTQADMVVG VVTLVLVFEA
ARRIMGLALP LICLGFLAYA LFGEYLPGEL AHRGYGLDQV VGQLAFGTEG IYGTPTYVSS
SYIFLFILFG AFLEQAGMID LFTNFALGTV GHTKGGPAKV AVVSSGLMGT INGSGVANVV
TTGQFTIPLM KKFGYTPAFA GAVEATSSMG GQIMPPVMGA VAFIMAETIN VPYVEIAKAA
AIPAMLYFFT VFWMVHLEAG RAGLKGLPKE ECPDPWVAIR ARWYLLLPLV GLVYLLFAGF
TPMFAGMVGL ALTVVLLFGS SLARHLNGTS LRLLFWIVLG LACSAFAKVG IISVVAVVAV
LAVLLAPRAD GRHTLRLAAR ALVDGALHAL PVGVACALVG VIIGSLTLTG GATAFAGYII
QIGDDSLFVS LLLTMLTCLV LGMGIPTIPN YIITSSIAAP ALLELGVPLI VSHMFVFYFG
IMADLTPPVA LAAFAAAPIA KESGLKIGVR AVQIAIAGFI VPYMAVYAPE LMLQGDKGFE
ATLYVVFKAL LAVTLWGTAV VGYFRSPMNP LERVLAFVAA SMLVVALPIT DELGFGLAAL
VLGWHIWRSR DTQALTV
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