Gene Tmz1t_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0423 
Symbol 
ID7084934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp482792 
End bp484276 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content70% 
IMG OID643697455 
Producttranscriptional regulator, GntR family with aminotransferase domain 
Protein accessionYP_002354098 
Protein GI217968864 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTGCC GACTCAGCTG CGAGCTCATC GCCCACGCTT ATGCGGAACA GGCGCCCTCG 
TCCAGCGCCC GCGCGCGCCT CTACCTCGCC ATCCGCGAGG CCATCATCGC GCGCCGGCTC
GCCCCCGGCA CCGCGCTGCC GCCCACCCGC ACCCTGGCGG CGGATCTGGC CTTGGGGCGC
AACACCGTGG TGCGGGTGTA CGACCAGCTC ATCGTCGAGG GCTATCTGGA CAGCCGGGTG
GGCTCGGGCA CCTTCGTCTC CGACGCCGTG GCCGCTACCG CGCCGCAGCA AAAACCGCGG
CGGATGGTCG GCGCGCGCAG CGAGGGATTG TCGCGAAGGG GGTGCCGGAT CGCCGCCGAT
GCGCTGTCGA GCCGCGTGCA GGCGGGCGCA TTCATGCCCG GCTTCCCGGA CGTCACCCAT
TTTCCCTTCG CCACCTGGCG CAAGCTGGTC GCCAAGCAGA TGCGGCTCGA GCAGCGCCAC
CTCGCACAGT ACGGCTACGG CGGCTACGGG CCGCTGAAGC TGGTGCTCGC CGAATACCTG
CGCGTGACCC GCATGATGTC GTGCAGCCCG CAGCAGATCC TGATCCTGAA CGGCTCGCAC
CAGGCGCTCG ACCTGTGTGC GCGCATGCTC GCCGACGTCG GCGACGTGGC GTGGATGGAG
GATCCGGGCT ACTGGGGGGC GCGCAACGTG CTGTCCGCCT GCGATCTCGC CATCCACCCG
GTGCCGGTGG ACGCGCAGGG CATCCATCCT CAGGCCGAGG ACTGGGACCA TCCGCCGCGC
CTGATCTTCG TGTCGCCCTC GAGCCAGTAC CCGACCGGGG CGGTGATGTC GCTCGAACGC
CGGCTCCGCC TGCTCGAATA CGCCGAGAAG AACCGCATCT GGATCATCGA GGACGACTAC
GACAACGAGA TCCGCTACCA CGACCACCCG GTGGCCTCGC TGTTCGGCCT GTCGGCGGCG
CAGCGGGTGA TCTACGTCGG TACCTTCAGC AAGGTGATGT ATCCCGGCCT GCGCCTGGCC
TACCTGGTGG TGCCGGAGGA TCTCGTCGAG GCCTTCACCA CCGGCAACGC CGAGCTCTAC
CGCGAGGGCC GCATGCTCGA GCAGGCGGCG CTGGCCGAGT TCATCGACGG CGGCCATTTC
ACCACCCACA TCCGCCGCAT GCGCGGCATC TACGAGGAGC GCCGCGACCG CCTCATCGCG
GTGCTGCGGC GCCACCTCGC CGGCATCGCC ACGCCGGCCG GCGGCCTCGC CGGCCTGCAC
ATCCCGGTCC ACTTCGAGCG CCCGCTCGAC GACGTGCTGC TCTCATCGCA GGCGCTGCGC
GAGGGCGTGG TGATGCGGCC GCTGTCGCTC TACGCGATCG ACGCCGCCAA CCGGCGCCCC
GGCATGAACC TCGGCTTCGC GGCGGTCCCG GTGGAGCAGA TCGAGGCCCC GGCACTCAAG
CTGGTGCGGC TGATCCACGG CCTCCTGCCG GCAGGAGGCC GCTGA
 
Protein sequence
MDCRLSCELI AHAYAEQAPS SSARARLYLA IREAIIARRL APGTALPPTR TLAADLALGR 
NTVVRVYDQL IVEGYLDSRV GSGTFVSDAV AATAPQQKPR RMVGARSEGL SRRGCRIAAD
ALSSRVQAGA FMPGFPDVTH FPFATWRKLV AKQMRLEQRH LAQYGYGGYG PLKLVLAEYL
RVTRMMSCSP QQILILNGSH QALDLCARML ADVGDVAWME DPGYWGARNV LSACDLAIHP
VPVDAQGIHP QAEDWDHPPR LIFVSPSSQY PTGAVMSLER RLRLLEYAEK NRIWIIEDDY
DNEIRYHDHP VASLFGLSAA QRVIYVGTFS KVMYPGLRLA YLVVPEDLVE AFTTGNAELY
REGRMLEQAA LAEFIDGGHF TTHIRRMRGI YEERRDRLIA VLRRHLAGIA TPAGGLAGLH
IPVHFERPLD DVLLSSQALR EGVVMRPLSL YAIDAANRRP GMNLGFAAVP VEQIEAPALK
LVRLIHGLLP AGGR