Gene Tmz1t_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0406 
Symbol 
ID7084917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp465831 
End bp467660 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content69% 
IMG OID643697439 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002354082 
Protein GI217968848 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA ACCTACCCAC GCTGACCCTG CCGCAGATGC TGCGCGAGCA GGCGAGGCTG 
CAACCCGGGC GGCCCGCCAT CCGCCAGAAG GACTTCGGCA TCTGGCAGGC CATCGGCTGG
GACGACTATT ACCGCCGCGC GAGCCATGTC GGCCTCGGCC TGCGCGCGCT CGGCCTGCCC
GCCGGCGGCC ATGTCGGCGT GCTCGCCGAG AACCGCATCG AATGGGTGCT GGCGCAGATG
GGCTGCGGCC TCGTCGGCGC CATCGCGGTC GGCGTCTATC CGACCAGCCC GGCACCCGAG
GTGGCCTACG TGCTCAATCA CGCCGACGTC GAGGTCGTGG TGTGCGAGGA CCAGGAGCAG
ACCGACAAGG TGATCGAGGC GCTCGACCAG CTGCCGCACC TGCGCGCCAT CGTGGTGATG
GAGACCAAGG GCCTGCGCAA CGCCGACGAG CGCGTGCGCG ATCGCATCCT GTCCTTCGCC
GACCTGGAGC GGCTCGGCGT CGAATACGAG GCCACCCACC GCCACCTGGT CGAGGAGACC
CTGGCCGCGC AGCGGCTCGA CGACCTCGCG CTGATGATCT ACACCTCGGG CTCCACCGGC
AAGCCCAAGG GCGCGATGAT CCGCTACGCC AACATCCGCG GCGTCGCACC CGGCATCATC
GACCGCCTCG GGCTCGCGGC CGACACCGTG CACCTGTCCT ACCTGCCCCT TTGCCACGTC
GCCGAGCAGA TGCTGACCAC CTTCTGCCCG ATCTACCTCG GCTCCACCGT CGCCTTCGGC
GAGTCGATCC GCACCGTGCA GGAGGACCTG CGCGAGATCG CGCCCACGAT GTTCCTCGGC
GTGCCGCGCA TCTGGGAGAA GCTGCACTCG GCGATCACGA TCCGGATGCA GGAGAGCGGG
CCCGTGCAGC GCTGGCTGTT CGCACGCGCG CTGGCGGCCT GCGCGCCCTT CGCCCACAAG
TCGGCGGCGC AGCGCACGGC GGGCGAGCGC CTGACCCACG CCATCTGCTA CGGCCTCATC
CTGCGCGCGC TGCAGAACTT CATCGGCCTG CGCAAGGCGC GCGTGGCGCT GACCGGCGCG
GCGCCGATCC CGCCCGCAGT GGTGCACTTC TTCCGTACCC TCGGGGTGCC GCTGGTCGAG
GTCTACGGCC TCACCGAATC GACCGGCATG ATCACCGGCC AGCCGCTCGA CGCGGTGGCC
TTCGGTTCGG TCGGCACGCC CATCCTCGGC GTCGAGCACC GCATCGGCGC GCGTGGCGAG
CTGCTGGTCC ACGGCGAGAT GGTCTTCGCC GGCTACTACA AGAACCCGGA GGCGACCGCC
GACGCCATCC GCGACGGCTG GCTGCACACC GGCGACGTGG TCGAGGAGCG CGACGGCCAG
CTCTACATCG TCGATCGCCT CAAGGACATC ATGATCACCG CCGGCGGCAA GAACCTGACG
CCGTCCGAGA TCGAGAAGGC GATGAAGTCC AGCCCCTACA TCAAGGAGTG CATCGTCGTT
GCCGACGGGC GCAAGTTCGT CTCGGCGCTG ATCCAGATCG ACTACGAGAC GGTGTCGAGA
TGGGCCGAGG GCCGCCAGAT CCCCTTCACC CACTTCCGCT CGCTGGTCGA GCACCCCGAG
GTGCGCGCGC TGATCGAGGC CGAGATCGCA CGCGGCAACG CCCAGCTCGC CCAGGTCTCG
CACATCCGCC GCTTCCACCT GCTGAACAAG GAGCTCGACC ACGACGACGG CGAGGTCACG
GCGACCATGA AGGTGCGTCG CGCGAGCGTC TACAAGACGT ACGCCGACGT GATCGAAGCC
ATGTACCGGG GAGGGGCCGC CCATGCCTGA
 
Protein sequence
MSNNLPTLTL PQMLREQARL QPGRPAIRQK DFGIWQAIGW DDYYRRASHV GLGLRALGLP 
AGGHVGVLAE NRIEWVLAQM GCGLVGAIAV GVYPTSPAPE VAYVLNHADV EVVVCEDQEQ
TDKVIEALDQ LPHLRAIVVM ETKGLRNADE RVRDRILSFA DLERLGVEYE ATHRHLVEET
LAAQRLDDLA LMIYTSGSTG KPKGAMIRYA NIRGVAPGII DRLGLAADTV HLSYLPLCHV
AEQMLTTFCP IYLGSTVAFG ESIRTVQEDL REIAPTMFLG VPRIWEKLHS AITIRMQESG
PVQRWLFARA LAACAPFAHK SAAQRTAGER LTHAICYGLI LRALQNFIGL RKARVALTGA
APIPPAVVHF FRTLGVPLVE VYGLTESTGM ITGQPLDAVA FGSVGTPILG VEHRIGARGE
LLVHGEMVFA GYYKNPEATA DAIRDGWLHT GDVVEERDGQ LYIVDRLKDI MITAGGKNLT
PSEIEKAMKS SPYIKECIVV ADGRKFVSAL IQIDYETVSR WAEGRQIPFT HFRSLVEHPE
VRALIEAEIA RGNAQLAQVS HIRRFHLLNK ELDHDDGEVT ATMKVRRASV YKTYADVIEA
MYRGGAAHA