Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0406 |
Symbol | |
ID | 7084917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 465831 |
End bp | 467660 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643697439 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002354082 |
Protein GI | 217968848 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA ACCTACCCAC GCTGACCCTG CCGCAGATGC TGCGCGAGCA GGCGAGGCTG CAACCCGGGC GGCCCGCCAT CCGCCAGAAG GACTTCGGCA TCTGGCAGGC CATCGGCTGG GACGACTATT ACCGCCGCGC GAGCCATGTC GGCCTCGGCC TGCGCGCGCT CGGCCTGCCC GCCGGCGGCC ATGTCGGCGT GCTCGCCGAG AACCGCATCG AATGGGTGCT GGCGCAGATG GGCTGCGGCC TCGTCGGCGC CATCGCGGTC GGCGTCTATC CGACCAGCCC GGCACCCGAG GTGGCCTACG TGCTCAATCA CGCCGACGTC GAGGTCGTGG TGTGCGAGGA CCAGGAGCAG ACCGACAAGG TGATCGAGGC GCTCGACCAG CTGCCGCACC TGCGCGCCAT CGTGGTGATG GAGACCAAGG GCCTGCGCAA CGCCGACGAG CGCGTGCGCG ATCGCATCCT GTCCTTCGCC GACCTGGAGC GGCTCGGCGT CGAATACGAG GCCACCCACC GCCACCTGGT CGAGGAGACC CTGGCCGCGC AGCGGCTCGA CGACCTCGCG CTGATGATCT ACACCTCGGG CTCCACCGGC AAGCCCAAGG GCGCGATGAT CCGCTACGCC AACATCCGCG GCGTCGCACC CGGCATCATC GACCGCCTCG GGCTCGCGGC CGACACCGTG CACCTGTCCT ACCTGCCCCT TTGCCACGTC GCCGAGCAGA TGCTGACCAC CTTCTGCCCG ATCTACCTCG GCTCCACCGT CGCCTTCGGC GAGTCGATCC GCACCGTGCA GGAGGACCTG CGCGAGATCG CGCCCACGAT GTTCCTCGGC GTGCCGCGCA TCTGGGAGAA GCTGCACTCG GCGATCACGA TCCGGATGCA GGAGAGCGGG CCCGTGCAGC GCTGGCTGTT CGCACGCGCG CTGGCGGCCT GCGCGCCCTT CGCCCACAAG TCGGCGGCGC AGCGCACGGC GGGCGAGCGC CTGACCCACG CCATCTGCTA CGGCCTCATC CTGCGCGCGC TGCAGAACTT CATCGGCCTG CGCAAGGCGC GCGTGGCGCT GACCGGCGCG GCGCCGATCC CGCCCGCAGT GGTGCACTTC TTCCGTACCC TCGGGGTGCC GCTGGTCGAG GTCTACGGCC TCACCGAATC GACCGGCATG ATCACCGGCC AGCCGCTCGA CGCGGTGGCC TTCGGTTCGG TCGGCACGCC CATCCTCGGC GTCGAGCACC GCATCGGCGC GCGTGGCGAG CTGCTGGTCC ACGGCGAGAT GGTCTTCGCC GGCTACTACA AGAACCCGGA GGCGACCGCC GACGCCATCC GCGACGGCTG GCTGCACACC GGCGACGTGG TCGAGGAGCG CGACGGCCAG CTCTACATCG TCGATCGCCT CAAGGACATC ATGATCACCG CCGGCGGCAA GAACCTGACG CCGTCCGAGA TCGAGAAGGC GATGAAGTCC AGCCCCTACA TCAAGGAGTG CATCGTCGTT GCCGACGGGC GCAAGTTCGT CTCGGCGCTG ATCCAGATCG ACTACGAGAC GGTGTCGAGA TGGGCCGAGG GCCGCCAGAT CCCCTTCACC CACTTCCGCT CGCTGGTCGA GCACCCCGAG GTGCGCGCGC TGATCGAGGC CGAGATCGCA CGCGGCAACG CCCAGCTCGC CCAGGTCTCG CACATCCGCC GCTTCCACCT GCTGAACAAG GAGCTCGACC ACGACGACGG CGAGGTCACG GCGACCATGA AGGTGCGTCG CGCGAGCGTC TACAAGACGT ACGCCGACGT GATCGAAGCC ATGTACCGGG GAGGGGCCGC CCATGCCTGA
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Protein sequence | MSNNLPTLTL PQMLREQARL QPGRPAIRQK DFGIWQAIGW DDYYRRASHV GLGLRALGLP AGGHVGVLAE NRIEWVLAQM GCGLVGAIAV GVYPTSPAPE VAYVLNHADV EVVVCEDQEQ TDKVIEALDQ LPHLRAIVVM ETKGLRNADE RVRDRILSFA DLERLGVEYE ATHRHLVEET LAAQRLDDLA LMIYTSGSTG KPKGAMIRYA NIRGVAPGII DRLGLAADTV HLSYLPLCHV AEQMLTTFCP IYLGSTVAFG ESIRTVQEDL REIAPTMFLG VPRIWEKLHS AITIRMQESG PVQRWLFARA LAACAPFAHK SAAQRTAGER LTHAICYGLI LRALQNFIGL RKARVALTGA APIPPAVVHF FRTLGVPLVE VYGLTESTGM ITGQPLDAVA FGSVGTPILG VEHRIGARGE LLVHGEMVFA GYYKNPEATA DAIRDGWLHT GDVVEERDGQ LYIVDRLKDI MITAGGKNLT PSEIEKAMKS SPYIKECIVV ADGRKFVSAL IQIDYETVSR WAEGRQIPFT HFRSLVEHPE VRALIEAEIA RGNAQLAQVS HIRRFHLLNK ELDHDDGEVT ATMKVRRASV YKTYADVIEA MYRGGAAHA
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