Gene Tmz1t_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0376 
Symbol 
ID7084882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp430011 
End bp431291 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content68% 
IMG OID643697406 
ProductIntegrase catalytic region 
Protein accessionYP_002354054 
Protein GI217968820 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAACGA AGCACATCGA GGTGAATCCT GTACGCCGTC TGGTTTGCGG AGTGCAGGAG 
ATGTTGGAGC CGGAGGCGGT CACGACGATC GTTCGGTTGG GGCAATCGGG CTGGGGTGCG
AAGCGGATTG CGAAGGCGCT GGGCATCGCG CGCAACACGG TGCGGCGGTA TCTGAACGCG
GGCGGGCCGG TGGCGTACCG GCAGCCGCAG CGTGCCAGCG TGCTGGGCGG TCACGACGCA
TGGCTGCGGG AGCGTTTCCT GCAGCACCGG GGCAACTGCG ACGTGGTGCG TCAGCAGTTG
AGCAAGGAAT TGGGGATCGA GACGAGCCTG CGCACGGTCG AGCGCGCGTG TCGAGGGTTC
CGCCAGGAAC TGGAGGCGAG TCGCCGTGCG ACGATCCGCT TCGAGACCGG ACCGGGCGAA
CAGATGCAGA TCGACTTCGG CCAGACACGT GTGCTGATCG GCGGCGAGTC GGTGCGAGTG
TTCCTGTTCG TGGCGACGCT GGGCTATTCG CGCCGGGGAT TTGCGTGCGC GTTCCGGCAC
GAGCGCCAGA GTGCGTGGTT CGCTGGGATC GAGGCGGCGT TTGTCCACTT CGGCGGACGG
CCGCAGACGC TGCTCATCGA CAACGCCAAG GCGCTGGTCG ACAAACACGA CACGCAGACG
CGCCAGGTCC GACTCAACAG CCGCTTCGAG GCGTTCTGCC GGCACTGGGA TATCCGTGCC
AAGGCGTGCG CGCCGTTTCG CGCGCGCACC AAGGGCAAGA CCGAGAACGG CGTGGGCTAC
GTGAAGAAGA ACGCCATCGC CGGCCATGCT TTCGAGAGCT GGACGGCGAT GGAGGCGCAC
CTGGCGCGCT GGCAGCGCGA GGTGGCCGAT GTGCGCATCC ACGGTACGAC CGGTGTCACG
CCCGCTGAGC GCTTCGACTT GGAGCGTGAA CACCTGCGTC CGGTTGCCGG GATCGCCCCC
TTCCTGCAGG TGCGCGAGCT CGTGCGCCGA GTCAATGCGG AGGGCTGCAT CGAGCTCGAC
ACCAACGCCT ACAGCGTGCC GTGGCGGCTG ATTGGCGAGA CGGTGACGGT CGTGGTCAGC
GCCGACACCG TGGTGGTCGA GTACGCCGGC GAGGAAGTCG CCCGCCATGC GGAGCTCGCC
GGCAGTCGCG GTCGCAGCAT CGAGCGCAGC CACCTGCTGG GTGGGTCGCT GCCGCCGGCC
CAGATCGAGG CGCCGCCGCC CACCGATGCG CTGCTGCGTC CGCTGGCCGA GTACGAAGCG
CTCGTCGGAG GAGGCTGGTG A
 
Protein sequence
METKHIEVNP VRRLVCGVQE MLEPEAVTTI VRLGQSGWGA KRIAKALGIA RNTVRRYLNA 
GGPVAYRQPQ RASVLGGHDA WLRERFLQHR GNCDVVRQQL SKELGIETSL RTVERACRGF
RQELEASRRA TIRFETGPGE QMQIDFGQTR VLIGGESVRV FLFVATLGYS RRGFACAFRH
ERQSAWFAGI EAAFVHFGGR PQTLLIDNAK ALVDKHDTQT RQVRLNSRFE AFCRHWDIRA
KACAPFRART KGKTENGVGY VKKNAIAGHA FESWTAMEAH LARWQREVAD VRIHGTTGVT
PAERFDLERE HLRPVAGIAP FLQVRELVRR VNAEGCIELD TNAYSVPWRL IGETVTVVVS
ADTVVVEYAG EEVARHAELA GSRGRSIERS HLLGGSLPPA QIEAPPPTDA LLRPLAEYEA
LVGGGW