Gene Tmz1t_0320 details

Gene Information

• Locus tag: Tmz1t_0320
• ID: 7085621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 361755
• End bp: 363740
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643697357
• Product: hypothetical protein
• Protein accession: YP_002354005
• Protein GI: 217968771
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3843] Type IV secretory pathway, VirD2 components (relaxase)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACC GCCGCGACGA CGATTTCCGC GTGCGCCCCA GCGCCCCGAA GAACCGGGGC 
AAGGGCCAGG GGCAGAGCTT CGTTTCCAAG GTACTCAAGC AGGCGGGCAA GGCCAGCAGC 
GGCAAGTCCA CGGTGCGCCT CCCAGCATCG GCGCGTGGCA CCGGCCAGCG CCCCGGCTCG 
CGCCTGGGGC GCGGCCACAC GGCGGCGCGC TTCGCCAGGG CGAAGCTGAC GCCCATGTCG 
CGGCGCGTGA CCATCAAGAC GCTGCTGGTG AATCACCAGC GGGCCAGCCC GCAGTCGCTC 
GCCAAGCACC TGCGCTACAT CGAGCGCGAT GGCGTGGGGC GCGACGGCGA GCCGGGCCAA 
GCCTACGGGC CGCAGACCGA TACCGCCGAC CTCGACGCCT TCAAGGAACG CTGCGCCGAC 
GACCGGCACC ATTTCCGCTT CATCCTCTCG CCCGAGGATG GCGCGGAGCT GGAAGACCTG 
CGCACCTACA CGCGGCACCT CATGGGCCGC ATGGAGGCCG ACCTGGGCAC GGGCCTGGAT 
TGGGTGGCCG TCAACCACTG GAACACCGAC AACCCGCACA CGCACATCGT CGTGCGCGGG 
CGCGACGACA TCGGCAAAGA CCTCATCATC GCGGGCGACT ACATCGCCGA CGGTTTCCGC 
CACCGCGCCG CAGAGCTGGC GACCGAATGG CTGGGGCCGC GCACCGAACT GGAGATCCAG 
CAGACCTTGC AGCGCGAGGT GGAGCAAGAG CGGTGGACGA GCCTGGATCG CACCTTGAAG 
CGCGAAGCCG GCGACGATGG CCTGTTGCAT GTCGAACGGC TCAACGAACC CCACTTGCAG 
CGCCAGCGCC TGCTGCTGAT CGGCCGCCTG CAACGCTTGC AGCGCCTGGG CCTGGCCGAC 
GAGACGCAGC CCGGCACCTG GGCCGTCCAT GCCGATGCGG AAAAGACCCT GCGTGCCCTG 
GGCGAGCGCG GCGACATCAT CCGCACCATG CAGCGGGCCA TGCGCGGCGA GCCGCGCGAG 
CTGGCGGTGT TCGAGCCGGG CGACGACGGG CAAACCATCC TCGGGCGCGT GGCCGCGAAG 
GGACTGGCCG ACGAGCTGCG CGACCGGGGC TATCTGGTCA TCGACGGCGT GGATGGCAAG 
GCGCACTACG TCGCGCTCAA CGCCCACGAC GAACTGGCGA ACTATCCGAC CGGCGCCGTG 
GTGGAGGTCA AGGGATCGGC CGACGTGCGC GCAGCCGACA GGAACATCGC CGCGCTGGCG 
AGCGATGGCC TGTACCGCAC CGATCACCAC TTGGCGATCG AGCAAGGCCG AGCCAAAGCC 
GGACGCGATC CGCAGGAGGT TGTCGCCGCC CACGTCCGCC GGCTGGAAGC CCTGCGCCGG 
GCCGGCATTG TGGAGCGCGT GGCGGAAGGG CTATGGAAGG TGCCGGACGA CCTGGCCGAG 
CGTGGCCGCC AGTACGACGC GCAGCGCCTG GGCGGCGTGG CTGTGGAACT GAAATCGCAC 
TTGCCCATCG AGCGGCAGGC CCGCGTGATC GGTTCCACCT GGCTCGACCA GCAGTTGATC 
GGTGGCGGCT CGGGCCTGGG CGACCTGGGC TTTGGCGGCG AGGCCAAGCA GGCCATGCAG 
CAGCGCGCCG ACTTCCTGAC CGAACAAGGG CTGGCCGAGC GGCGCGGGCA GCGCGTGATC 
CTCGCCCGGA ACCTGCTGGG CACGTTGCGC AATCGGGAAC TGGCGCAGGC CGCCAAGGAC 
ATTGCCGCCG AATCCGGCTT GGAGCACCGT CCGGTGGCCG ACGGCCAGCG CGTGGCCGGT 
ATCTACCGGC GCAGCATCAT GCTCGCCAGC GGGCGCTACG CGATGCTCGA TGACGGCATG 
GGGTTCAGCT TGGTGCCGTG GAAGCCAGTG ATCGAACAGC GGCTGGGCCA GCAGCTCGCG 
GCCACAGTGC GCGGTGGCGG GGTGTCTTGG GAGATTGGGC GCGCACGCGG GCCTGCTATC 
AGTTGA 

 

Protein sequence

MSDRRDDDFR VRPSAPKNRG KGQGQSFVSK VLKQAGKASS GKSTVRLPAS ARGTGQRPGS 
RLGRGHTAAR FARAKLTPMS RRVTIKTLLV NHQRASPQSL AKHLRYIERD GVGRDGEPGQ 
AYGPQTDTAD LDAFKERCAD DRHHFRFILS PEDGAELEDL RTYTRHLMGR MEADLGTGLD 
WVAVNHWNTD NPHTHIVVRG RDDIGKDLII AGDYIADGFR HRAAELATEW LGPRTELEIQ 
QTLQREVEQE RWTSLDRTLK REAGDDGLLH VERLNEPHLQ RQRLLLIGRL QRLQRLGLAD 
ETQPGTWAVH ADAEKTLRAL GERGDIIRTM QRAMRGEPRE LAVFEPGDDG QTILGRVAAK 
GLADELRDRG YLVIDGVDGK AHYVALNAHD ELANYPTGAV VEVKGSADVR AADRNIAALA 
SDGLYRTDHH LAIEQGRAKA GRDPQEVVAA HVRRLEALRR AGIVERVAEG LWKVPDDLAE 
RGRQYDAQRL GGVAVELKSH LPIERQARVI GSTWLDQQLI GGGSGLGDLG FGGEAKQAMQ 
QRADFLTEQG LAERRGQRVI LARNLLGTLR NRELAQAAKD IAAESGLEHR PVADGQRVAG 
IYRRSIMLAS GRYAMLDDGM GFSLVPWKPV IEQRLGQQLA ATVRGGGVSW EIGRARGPAI 
S