Gene Tmz1t_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0260 
Symbol 
ID7084382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp294215 
End bp295252 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content63% 
IMG OID643697301 
Producttransposase IS4 family protein 
Protein accessionYP_002353949 
Protein GI217968715 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGC GTAGCGCCAT CAAGACCGAC CTGTTCGCCG ACGAGCATCA CCGCAAGAAG 
ATCGATTCGC TGGGCGACCC GCTGATCGAC ATCGAGTCGC ACATCGACTT TGCGGCGCTG
GCCGCCGAGG TCGATCGGGT CGCACCGCGC ACGGTCAGCG CGCAAGGCGG CCGTCCGCCT
TACCCGACGG AGACGATGGT TCGGATCCTG GTGCTCAAGC GCCTGTACAA CCTGTCGGAC
GAGCAGATGG AGTACCAGCT GCTCGACCGC ATGAGCTACA AACGCTTCTG CGGGCTCGCG
AACGCAGCCA ATATTCCGGA CCGCACCACG GTGTGGACCT TCGAGAACCG GATCGGTGAG
CTTGGCGCGA AGGCGCTCTT CGAGGGCGTC TCGGCGCAGC TGCTCAAACG GGGCTTCATC
GCGCGTGGCG GGCAGATCAT CGACGCCACC TTGGTGCCTG CCCCCAAGCA GCACAACAGC
CGAGGGGAGA AGGCGCTGAT CGACCAAGGC GCGATGCCTG CCGACTGGAA GCCGGCCAAG
CGCCGGCAGA AGGACACCGA CGCCACCTGG ACGAAGAAAC ACGGCAAGAG CCACTTCGGC
TACAAGCTGT CGATCAACGT CGACAAGAAG TACAAATTCA TCCGTGCGCT CGAGACCGAC
ACGGCCAGCA CGCACGACAG CCAGCACTTC GACAACGTCT TCGACACGAG CAACACGAGC
CGCGACGTCT ATGCCGATCG CGGCTATCCG TCCGAGGAGC GGGCGGCCTG GTTGAAGGCG
AACGGCTTTC GGAATCAAAT CCAGCGCAAA GGACAACGCA ACAAGCCGCT GTCCGAATGC
CAGCAGCGGC GGAACACGCG CATCGCGCGG ACGCGAGCGC GGGTGGAACA CCCGTTCGCG
GCCATCGCGC AAATGGGCGG CAAGTTGATC CGAACCATCG GCCAGGCGCG GGCGAGCTTC
GCGATGACGA TGATGGCAGC CTGCTACAAC CTGAAGCGGC TGACGTATTT CCAGAAGGCC
GGAATCGTGG CCTTCTGA
 
Protein sequence
MKPRSAIKTD LFADEHHRKK IDSLGDPLID IESHIDFAAL AAEVDRVAPR TVSAQGGRPP 
YPTETMVRIL VLKRLYNLSD EQMEYQLLDR MSYKRFCGLA NAANIPDRTT VWTFENRIGE
LGAKALFEGV SAQLLKRGFI ARGGQIIDAT LVPAPKQHNS RGEKALIDQG AMPADWKPAK
RRQKDTDATW TKKHGKSHFG YKLSINVDKK YKFIRALETD TASTHDSQHF DNVFDTSNTS
RDVYADRGYP SEERAAWLKA NGFRNQIQRK GQRNKPLSEC QQRRNTRIAR TRARVEHPFA
AIAQMGGKLI RTIGQARASF AMTMMAACYN LKRLTYFQKA GIVAF