| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0249 |
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| Symbol | |
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| ID | 7084370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 283268 |
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| End bp | 285259 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643697291 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002353940 |
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| Protein GI | 217968706 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000268408 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCC TCCTCAACGC GCCCCAGCGC GAAGCGATCC GCTATCTCGA CGGCCCCTGC
CTGGTGCTGG CCGGCGCCGG CAGCGGCAAG ACGCGGGTGA TCACGCACAA GATCGCGCAC
CTGATCAACG AGTGCGGCAT CAGCCCCAAC AACATCGCTG CCATCACCTT CACCAACAAG
GCCGCCAAGG AGATGCAGGA GCGCGTCGCC CACATCATGG GCGGGCGCGT GCCGGGTGGG
CTCACGGTGT GCACCTTCCA CGCGCTCGGC GTGCGCATCG TCCGCCAGGA GGCCAAGCAC
TGCGGCTTGA AGCCGCAGTT CTCCATCCTC GACGCCTCCG ATACCGTGCA GATCGTCTCG
GACGTGGCCG GCGACAGCGA CAAGGGCATC GCCAAGCAGA TGCAGTGGCA GATCTCGTCG
TGGAAGAACG CGATGATCAC GCCCGAGGAG GCCGCCCAGC TCGCCGACAA CGAGATCGCC
TCGGTCGCCG CCAGGCTCTA CAAGGAATAC GAGCGCACCC TGCGCGCCTA CCAGGCGGTG
GATTTCGACG ACCTCATCGC GCTGCCGGTG CGCCTCTTCG ACGAGCATCC GGAAGTGCGC
GAGCGCTGGC AGAACAAGCT GCGCTACCTG CTGGTGGACG AGTACCAGGA CACCAACCGC
GCCCAGTACC GCTTGCTGAA GCTGCTGTCC GGCGTGCGCG GCGCCTTCAC CGCGGTGGGC
GACGACGACC AGGCGATCTA CGCCTGGCGG GGCGCCGACG TCGAGAACCT GAAGCTGCTG
CAGCAGGACT ACCCCAAGCT CAAGGTCATC AAGCTCGAGC AGAACTACCG CTCCTCGCGC
CGCATCCTCG AGGCCGCCAA CACCGTCATC GCCAACAACG AGAAGCTCTT CGACAAGCGC
CTGTGGTCCG AGCACGGCCA GGGCGAACAG ATCGTCGTCA CCAACTGCCG TGACGCCGAG
CACGAGGCCG AGTGGGTGGC GACCAAGATC ACCGCGCACA AGTTCGAGCA CCGCACCCGC
TTCAAGGACT ACGCCATCCT TTACCGCGGC AACCACCAGG CCCGCCTCAT CGAGCAGCAG
CTGCGCAACC ACCGCATCCC CTACGTGATG TCGGGCGGGC AGAGCTTCTT CGACAAGGCC
GAGATCCGCG ACCTCATCGC CTGGCTGCGC CTGCTGGTGA ACGAGGACGA CGACCTCGCC
TTCATCCGCG CCATCACCAC GCCGCGCCGC GGCATCGGCG CCGCCACCAT CGAGGCCCTC
GGCGCCTACG CCGGCCATCG CCACAGCAGC CTGTTTGCCG CGGTGTTCGA GGAGGGGCTC
ACCCAGCATC TGAATGCCAA GCAGCTGCAG GGCGTGCAGG AGTTCGCCGC CTACATCAAC
CGCCTGCAGT ACCGCGCCCC GCGCGAGCCC GCCGCGCAGC TACTCGAAGA CCTGCTCGGC
GCGATCCGCT ACGAGGCCTG GCTGTTCGAG CACTGCGACA CGCGCGAGGC CGAATCCAAG
TGGAGCAACG TGCGCGACTT CGTCGGCTGG CTCGGCCGCA AGGGCGAGGA GGACGGCAAG
AACCTGCTCG AGCTCACCCA GACCATCGCG CTGATGTCCA TGCTCGACAA GGAAGACCCC
GACTTCGACG GCGTGCAGAT GGCCACCCTG CACGCCTCCA AGGGCCTGGA GTTTCCGCAT
GTGTTCCTGG TCGGCGTCGA GGAGGGCCTG CTGCCGCACC AGAGCAGCAT CGACGAGGAC
AAGGTCGAGG AAGAGCGCCG CCTGATGTAC GTCGGCATCA CCCGCGCGCA ACGCAGCCTC
AACCTGACCT GGTGCGAGCG GCGCAAGTCG GGCAAGGAGT TCCGCACCTG CGAGCCGAGC
CGCTTCATCG CCGAGATGGG CGGCGACATC AAGATGAACG ACCGCAAGAC CGCGCAGCCG
GTGACGAAGG AAGAAGGCAA GGCGCGGCTG GCGAACCTGA TGGCGATGTT CGAGAACCGC
GACAAGGCTT GA
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| Protein sequence | MSALLNAPQR EAIRYLDGPC LVLAGAGSGK TRVITHKIAH LINECGISPN NIAAITFTNK
AAKEMQERVA HIMGGRVPGG LTVCTFHALG VRIVRQEAKH CGLKPQFSIL DASDTVQIVS
DVAGDSDKGI AKQMQWQISS WKNAMITPEE AAQLADNEIA SVAARLYKEY ERTLRAYQAV
DFDDLIALPV RLFDEHPEVR ERWQNKLRYL LVDEYQDTNR AQYRLLKLLS GVRGAFTAVG
DDDQAIYAWR GADVENLKLL QQDYPKLKVI KLEQNYRSSR RILEAANTVI ANNEKLFDKR
LWSEHGQGEQ IVVTNCRDAE HEAEWVATKI TAHKFEHRTR FKDYAILYRG NHQARLIEQQ
LRNHRIPYVM SGGQSFFDKA EIRDLIAWLR LLVNEDDDLA FIRAITTPRR GIGAATIEAL
GAYAGHRHSS LFAAVFEEGL TQHLNAKQLQ GVQEFAAYIN RLQYRAPREP AAQLLEDLLG
AIRYEAWLFE HCDTREAESK WSNVRDFVGW LGRKGEEDGK NLLELTQTIA LMSMLDKEDP
DFDGVQMATL HASKGLEFPH VFLVGVEEGL LPHQSSIDED KVEEERRLMY VGITRAQRSL
NLTWCERRKS GKEFRTCEPS RFIAEMGGDI KMNDRKTAQP VTKEEGKARL ANLMAMFENR
DKA
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