Gene Tmz1t_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0228 
Symbol 
ID7084349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp262238 
End bp263554 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content71% 
IMG OID643697270 
Producthistidine kinase 
Protein accessionYP_002353919 
Protein GI217968685 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGCC GCCCGCTCAG CTACGTCGCC CTCGTCATCG TCCTGCCGCT GGGGACGCTG 
ATGGTCCTGG CGGCCCTGGC CGCCGCCTAC CGCGGCAGCG ATGCCGCACT CGCCCTGCTG
GTGGTCGGGC TGGTCGGCTG GACGATCATG CTGGTGCACA ACCTGCGCCA GCTCGTCATC
TGGGCGCGCC AGCCGGTGGG CACCCCGGTG CCGCAGGTCG AGGGCCTGTG GGGGCGGATC
TTCGCCGAGA TCGGCGACCG CATGCAGAGC GAGTGCGAGG TCAAGGAGCG CCTCTCGGCC
GAACTCGGCC GCTTCCAGCA AGCCGCGCTG GCCATGCCCG ACGGCGTGAT CTACCTCGCC
GAGGACGACA CCATCGAGTG GATGAATCCG ATGGCCGAGC AGCACTTCGA CCTCGACCGC
CGCAAGGACC TGCGCATGGC CTTGCCCGGC CTGGTGCGCC AGCCCGAGTT CGTCCGCTAC
CTTGCCGGGC GCGAGTATGC CGAACCGCTG GTGATGCGCT CGCTGCGCCG GCGCGAGCGC
AGCCTGCAGG TGCAGGTCAT CGGCTTCGCT GGCAACCGGC GCATGGTGCT GTCGCGCGAC
GTCTCCCAGC TCGAGCGCCT GGAGACCATG CGGCGCGACT TCGTCTCCAA CGTGTCGCAC
GAGCTGCGGA CCCCGCTGAC CGTGGTCTGC GGCTTCCTCG AGACCCTGAT CGACGGCCTC
GACGACTTCG GGCGCGACGA GGTGCTGCAG TACCTGAGCC TCGCCAGCGA ACAGTCCTCG
CGCATGCAGC GCCTGATCGA GGAGTTGCTG ACCTTGTCGG CGCTCGAGAC CGGGGCGCCC
GCGCCGGCGG AAGAGCAGGT GGATGCCCAG GCGCTGGTGC GCGACGTCGT GCGCGATTGC
GAACTGCTCT CCGCGGGCCG TCACGAGGTG CGCCTGGTGC TCGAGGGTGG CGGCGAACTC
CTCGGCAGCC ACAAGGAATT GCGCAGCGCC TTCTCCAACC TGGCCAGCAA CGCGGTGCGC
TACACGCCGG CCGGCGGCCA CATCGAGATC GGCTGGCGCA GCGGTGCGGG TGGTGGCGAA
TTCTGGGTCG CGGACGACGG CATCGGCATC GACTCGGCGC ACATCCCGCG CCTGACCGAA
CGCTTTTACC GGGTGGATCG CGGGCGGTCG CGCGAGACCG GGGGCACAGG GCTGGGGCTG
GCGATCGTCA AGCACGTCAC CACGCGCCAC CAGGGCGAAC TCGCCATCGA GAGCGAACCG
GGGCGGGGCA GCCGCTTCAC GCTGCGCTTC ACGCCGGCAC GGGTCAGGCC GGCCTGA
 
Protein sequence
MIRRPLSYVA LVIVLPLGTL MVLAALAAAY RGSDAALALL VVGLVGWTIM LVHNLRQLVI 
WARQPVGTPV PQVEGLWGRI FAEIGDRMQS ECEVKERLSA ELGRFQQAAL AMPDGVIYLA
EDDTIEWMNP MAEQHFDLDR RKDLRMALPG LVRQPEFVRY LAGREYAEPL VMRSLRRRER
SLQVQVIGFA GNRRMVLSRD VSQLERLETM RRDFVSNVSH ELRTPLTVVC GFLETLIDGL
DDFGRDEVLQ YLSLASEQSS RMQRLIEELL TLSALETGAP APAEEQVDAQ ALVRDVVRDC
ELLSAGRHEV RLVLEGGGEL LGSHKELRSA FSNLASNAVR YTPAGGHIEI GWRSGAGGGE
FWVADDGIGI DSAHIPRLTE RFYRVDRGRS RETGGTGLGL AIVKHVTTRH QGELAIESEP
GRGSRFTLRF TPARVRPA