| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0226 |
|---|
| Symbol | |
|---|
| ID | 7084347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 260286 |
|---|
| End bp | 261260 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643697268 |
|---|
| Product | 4-hydroxybenzoyl-CoA reductase, beta subunit |
|---|
| Protein accession | YP_002353917 |
|---|
| Protein GI | 217968683 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | [TIGR03195] 4-hydroxybenzoyl-CoA reductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCC TCGCCGATTT CCGCACCCAT CGCCCCGCCA CCCTGGCCGA CGCGGTCAGT
GCGCTGGCCG CCGACGGGGC CGTTCCCCTG GCTGCCGGCA CCGACCTGCT GCCCAATCTT
CGTCGCGGCC TGGGACAGCC CGCCGTGCTG GTGGATCTGA CCGGAATCGG GGGCCTGGAG
ACGATCTCCA TCCTCGCCGA CGGCAGCCTG CGCATCGGTG CCGGCGCCAC GCTGGAGGCC
ATCGCCGAGC ACGGGCTCGT CCGCAACGCC TGGCCGGCAC TGGCCGAGGC GGCCGCGGCG
GTCGCGGGTC CGACCCACCG CGCCGCGGCC ACTTTGGGCG GCAACCTGTG CCAGGACACG
CGCTGCATCT TCTACAACCA GAGCGAGTGG TGGCGTGCCG GCAACGGCTA CTGCCTCAAG
TACCAGGGCG ACAAGTGCCA CGTCATCGTC AAGAACGATC GCTGCTACGC CACCTACCAC
GGCGACGTCG CCCCGGCGCT GATGGTGCTG GGCGCGCGTG TCGAGATCGC GGGGCCCGCG
GGCAGGCGCA GCCTCGCGGT GGAGGAATTG TTCCGCGAAG ACGGGGCGGG GCACCTGAGC
CTCGGACGGG GCGAACTGGT CGTGGCCGTG GAGGTTCCCC CCGCCAGCGG CTGGAGGACC
GTCTACGCCA AGGCACGCAT CCGCGACGCC GTCGATTTTC CGCTCGCGGG GGTCGCCGTC
GCCCTGCGCC GTGACGGAGA CCGGGTCGCC GGCCTGAAGG TAGCGATTAC CGGCACCAAC
TCCGCCCCGC TGCGCGTGCC CACGGACGAG CTCGTGGGAG GGCGCTGGGA TGCCGCCGCC
GCCGAGACCC TGTCCCAGCT GGTGCGCAAG ACCTCGAACG TGCTCAAGAC CACCGTCACC
GGCGTCGGCT ATCGGCGCCG GGTGCTGCTG GCGCTGGCGC CGCGGACGGT CGACGCGCTC
TGGCAGGGAG GCTGA
|
|---|
| Protein sequence | MNILADFRTH RPATLADAVS ALAADGAVPL AAGTDLLPNL RRGLGQPAVL VDLTGIGGLE
TISILADGSL RIGAGATLEA IAEHGLVRNA WPALAEAAAA VAGPTHRAAA TLGGNLCQDT
RCIFYNQSEW WRAGNGYCLK YQGDKCHVIV KNDRCYATYH GDVAPALMVL GARVEIAGPA
GRRSLAVEEL FREDGAGHLS LGRGELVVAV EVPPASGWRT VYAKARIRDA VDFPLAGVAV
ALRRDGDRVA GLKVAITGTN SAPLRVPTDE LVGGRWDAAA AETLSQLVRK TSNVLKTTVT
GVGYRRRVLL ALAPRTVDAL WQGG
|
|---|
| |