Gene Tmz1t_0216 details

Gene Information

• Locus tag: Tmz1t_0216
• Symbol: atpC
• ID: 7084337
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 250581
• End bp: 251006
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643697258
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002353907
• Protein GI: 217968673
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATGA CGGTTCATGT CGACATCGTC AGCGCGGAAG AGCAGATCTT CTCCGGGCTG 
GCCGAGTTTG TCGCATTGCC GGGCGAAGCG GGCGAGCTGG GCATCCTGCC CGGTCACATG 
CCGCTGATGA CCCGGATCAA GCCGGGTGCC GTGCGCGTGC GTGCCCAAAA CGCGACCGAG 
GAAGAGCTGA TCTTCGTCGC GGGAGGCCTG CTGGAGGTTC AACCGGGTCT GGTGACGGTG 
CTCGCCGACA CCGCGATCCG CGGCAAGGAC CTCGACGAGG CGAAGGCGCT CGAAGCCAAG 
CGCAAGGCTG AGGAAACCAT GGCGAACCAG ACCGCGCGTC TGGACTATGC CAAGGCCCAG 
GCCGAGCTCA TGGAAGCGGT GGCGCAGCTC GCCGCGATCC AGCGCCTGCG CAAGCGCGGT 
CACTGA 

 

Protein sequence

MAMTVHVDIV SAEEQIFSGL AEFVALPGEA GELGILPGHM PLMTRIKPGA VRVRAQNATE 
EELIFVAGGL LEVQPGLVTV LADTAIRGKD LDEAKALEAK RKAEETMANQ TARLDYAKAQ 
AELMEAVAQL AAIQRLRKRG H