| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0192 |
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| Symbol | |
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| ID | 7084313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 224995 |
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| End bp | 226707 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643697234 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_002353883 |
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| Protein GI | 217968649 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.274782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTGC AGAACCCCGC CGCCAAGTAC CGTCCCTTCG CCCCGATCGC GCTCGCCGAC
CGCCAGTGGC CGAACACGCT CATCGAGCGC GCCCCGATCT GGATGAGCAC CGACCTGCGC
GACGGCAACC AGGCGCTGTT CGAGCCGATG AACGTCGAGC GCAAGATGCG CATGTTCCGC
ACCGTGTGCG AGATCGGCTT CAAGGAGATC GAGGTCGGCT TCCCGTCGGC CTCGCAGACC
GACTTCGACT TCGTGCGCGC GCTCATCGAG GGCGGCCACA TCCCGGCCGA CGTGACCATC
CAGGTGCTCA CCCAGGCGCG CGAGGACCTC ATCCGCCGCA CCATGGAGTC GGTACGCGGC
GCGCCGCGCG CGATCATCCA CGTCTACAAC GCCACCTCGC CCACCTTCCG CGAGCTCGTG
TTCGGCATGG AGAAGCCGCA GGTACTCGCG CTCGCGGTCT CCGCCGTACG GCTGATCAAG
CAGATCGGCG CGGAAATGGA GAAGGAGTGC GGCACCGAGA TCCGCCTCGA ATACAGCCCG
GAGACCTTCT CCGCCACCGA ACTCGACTTC GCCCGGGAGG TCTGCGACGC CGTCACCGCC
GAGTGGGGCG CCACGCCCGA GAACAAGGTC ATCCTCAACC TCCCCGCCAC GGTCGAGGTC
GCCACGCCCA ACGTCTATGC CGACCAGGTC GAGTGGATGC ACCGCAACCT CGCCCGCCGC
GACAGCGTGG TGCTTTCGTT GCACCCGCAC AACGACCGCG GCAGCGGCGT CGCCGCCGCC
GAGCTCGGCC TGATGGCGGG CGCCGACCGC GTCGAGGGCT GCCTGTTCGG CAACGGCGAG
CGCACCGGCA ACGTCGACAT CGTCACCCTC GCCCTGAACA TGTACACCCA GGGGGTGTCG
CCCGGGCTCG ACTTCTCCGA CATCAACGCG GTCGCGCGCA CCGTCGAGTA CTGCAACCAG
CTTCCCATCC ACCCACGCCA CCCCTATGTG GGGGATCTCG TGTTCACGGC CTTCTCCGGC
TCCCACCAGG ACGCCATCAA GAAGGGATTC GCCGCTCAAA AGGCTGGCCA GCCGTGGAAC
GTGCCCTACC TCCCGATCGA CCCCGCCGAC GTCGGCCGCA GCTACGACTC CGTGATCCGG
GTGAATAGCC AGTCCGGCAA GGGCGGGATC GCCTACCTGC TCGAGACCGA ATACGGCATC
GTGATGCCGC GCCGCCTGCA GGTGGAGTTC TCGCGCGAGG TGCAGCAGGT CACCGACGCC
AGCGGCGGTG AGATGTCGGC GGCAGCGATC TGGGATCTGT TCCGCAGCAC CTACCTCGAC
AACGTCGAGC CGGTGCGCTA CGTCGAGCAC CACCTCTTCG AGCATGGCGC GGCGCAGGGC
ATCCGCCTCG TGGTCGAGTT CGGCGGCACC CGCCACCTGT TGGTCGGCGA GGGCAACGGC
CCGATCGACG CCGCCATCCA CGCCTTGCGC GGCGCCGGCA TCGACGTCCA GGTGCGCAGC
TTCGAGGAGC GCTCGGTGGC GCCCAGCGAG AACGGCGGCA ACGCCCAGGC CTGCGCCTTC
CTCGAGCTCA CCGAGGCAGG CGGACAGGGC GGCGATCGCT ACGGCGTGGG TATCGATGCC
AACATCGTCA CCGCCTCGAT CCGCGCAATC CTCAGCGGGG TCAATCGCCT GCAGCCGGAC
TGCGCCCGCG CACCCGCGGC GCGCGCAGCC TGA
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| Protein sequence | MMLQNPAAKY RPFAPIALAD RQWPNTLIER APIWMSTDLR DGNQALFEPM NVERKMRMFR
TVCEIGFKEI EVGFPSASQT DFDFVRALIE GGHIPADVTI QVLTQAREDL IRRTMESVRG
APRAIIHVYN ATSPTFRELV FGMEKPQVLA LAVSAVRLIK QIGAEMEKEC GTEIRLEYSP
ETFSATELDF AREVCDAVTA EWGATPENKV ILNLPATVEV ATPNVYADQV EWMHRNLARR
DSVVLSLHPH NDRGSGVAAA ELGLMAGADR VEGCLFGNGE RTGNVDIVTL ALNMYTQGVS
PGLDFSDINA VARTVEYCNQ LPIHPRHPYV GDLVFTAFSG SHQDAIKKGF AAQKAGQPWN
VPYLPIDPAD VGRSYDSVIR VNSQSGKGGI AYLLETEYGI VMPRRLQVEF SREVQQVTDA
SGGEMSAAAI WDLFRSTYLD NVEPVRYVEH HLFEHGAAQG IRLVVEFGGT RHLLVGEGNG
PIDAAIHALR GAGIDVQVRS FEERSVAPSE NGGNAQACAF LELTEAGGQG GDRYGVGIDA
NIVTASIRAI LSGVNRLQPD CARAPAARAA
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