| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0181 |
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| Symbol | |
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| ID | 7085278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 212315 |
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| End bp | 214528 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643697223 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002353872 |
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| Protein GI | 217968638 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCG TCATCGTCGA AGATTCCCCG CTCCTGCGGG ACAACCTGAT CCGCCTCTTT
GCCGACCATC CCGAGCTGAG CGTGCTCGGC AGCGCGGCCG GCGAGGACGC GGCCGTCGCG
CTGATCGCGG CGCAGCGCCC CGACACCGTG CTGCTCGACC TCTCGCTCTC CCAGGGCAGC
GGCCTTGGCG TGCTGCGCCG GCTGCGCGCC ACCCCGGGCC TGGCGCCGCG TGTGCTGGTG
CTGAGCAGCC GGCCTGCCGA CCCCTGGGAG GCGCTGTGTC TCGACGCCGG CGCGGATGCC
TTCCTGGACA AGGCCGGCGA CCCCAGCGTG CTGCTCGCCC AGCTCGCGAG CTGGATGCCG
CCGCTGCCGC TCGATGAGCT GCGCCGCCGT CGCCGGCTGC AGCAGCTGCA GGTGCTCGAT
ACCCGGGCCG AGCCCGCGCT GGACGCGATC GCCCGCCTCG CCGCACGCAT CGCGGAGGCG
CCGGTCGGGG TGATCAGCCT GGTGGACACC CACCGCCAGT GGTTCAAGGC GCGCGTGGGC
GTCGAAGTGC AGACGACCTC GCGTTCGGTG AGTTTCTGCG CCCATGCGCT GCTGGGTGAC
GGCCTCTTCG AGGTCGAGGA CGCCACCCTG GACCCGCGCT TCGCCGACAA CCCGCTGGTG
CGCGGCGACC CGGGGATCCG CTTTTATGCC GGCATGCCGC TGGTGATGCC GGGCGGCGAG
GTGGTGGGGA CGCTGTGCGT GATCGACTCC CGGCCGCGCC GCCTGGGTGC GACGGCGCGC
GAGGCGCTGG CGGTGCTGGC GCGCAGCGTC ACCGACGAGC TCGAGCTGCG CCAGCGTGTG
GGCGAGCTCG AGGAGGAGGT CGCCCGCCGC CACGAGGCCG AGGCGCGCAT CATGCAACTC
GCCACCCGCG ATGCGCTTAC CGGGCTGCCC AACCGCGCCG CGTTGATGGA CCGGCTGCAC
CAGGGGGTAC GGGCCGCGCA GCGCAGCGGT AACCTGCTCG CTGTGCTCTT CCTCGATCTC
GATCGCTTCA AGTGGATCAA CGACACGCTC GGCCACGACC TCGGCGACGC CCTGTTGCAG
GAGATGGCGC TGCGCCTGAG CCGGGCGGTG CGCGAGTGCG ACACCGTCGC CCGCCTCGGC
GGCGACGAGT TCGCGATCGT GCTCGGCGAT CTCTGGCAGG TCGCGGATGC GGAGGCGGTG
GCGGCCAAGA TCGTGGACGT CATCACCCGG CCGCTGGAGG TGCGCGGGCA TGCCCTGCGC
GTGGGCGGCA GCGTGGGCGT GGCGGTGTAC CCGTTCCAGG CCCACGACGA GGAGTCGCTG
CTGCGCCACG CCGACCTGGC GATGTACCAC GCCAAGGAGT CGGGCGGGAA CCGCCACCAG
CTCTTCTCCG AGCAGATGAA CGCGCGCGCG GTCGAGCGCA TGACCGTCGA GTCGGAGCTG
CGCGCCGCCA TCGCCGCCGG CCAGCTCGAG CTGCACTACC AGCCGCAGCT GTGCCTCGAA
GACGGCCGGC TTGCCGGCAT GGAGGCGCTG GTGCGCTGGC GCCATCCGCG CCTCGGCCTG
CTCGCACCCG GCCGCTTCGT GCCGCTCGCC GAGGACTGCG GGCTGATCTG GGAGCTCGGT
CTCGCGGTCC TGGAACTCGC GCTGGCGCAA CTCGCGGCCT GGGACCGGGC CGGGCTGGAG
GTGCCGCGCA TCGCGGTGAA TGTGTCCCCG GCGCAGCTGC GTCCGGAGCT GGTCGAGCGC
ATCGTGGAGA TCCTCGACCG ACACGGCGTC GCCGCGCGCC GGCTGGAGAT CGAGCTCACC
GAGAGCGCGC TCACCGCCGA CGGACCGGCC GCCAACGGCC TGTTGCAGGC GCTGCGCCGC
ATGGGCGCCT CGATCGCGAT CGACGATTTC GGCGTGGGCT ACTCCTCGCT GACCCTGCTG
CGCCGGCTGC CGATCTCGGC GCTCAAGATC GACCGCAGCT TCGTCGCCGA GCTCGCCACC
AACCGCCAGG ACGCGGCCAT CGTCGAGGCG ATCCTGCGCA TGGCGCACAG CGTGGGCCTG
CGCACCGTGG CCGAGGGCGT GGAGCATGCC GAACAGCAGG CGGCGCTCGG GGAGCTCGGC
TGCCAGGAGG TCCAGGGCTA TCTGTGCGCG CGCCCGCTCG AGGCGAAGGC GGCAAGCGCC
TGGCTCGCCG GGCAGCATGC GGGTGGGTTG GTGCCGAGCG CCGCGGCGGC GTGA
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| Protein sequence | MRIVIVEDSP LLRDNLIRLF ADHPELSVLG SAAGEDAAVA LIAAQRPDTV LLDLSLSQGS
GLGVLRRLRA TPGLAPRVLV LSSRPADPWE ALCLDAGADA FLDKAGDPSV LLAQLASWMP
PLPLDELRRR RRLQQLQVLD TRAEPALDAI ARLAARIAEA PVGVISLVDT HRQWFKARVG
VEVQTTSRSV SFCAHALLGD GLFEVEDATL DPRFADNPLV RGDPGIRFYA GMPLVMPGGE
VVGTLCVIDS RPRRLGATAR EALAVLARSV TDELELRQRV GELEEEVARR HEAEARIMQL
ATRDALTGLP NRAALMDRLH QGVRAAQRSG NLLAVLFLDL DRFKWINDTL GHDLGDALLQ
EMALRLSRAV RECDTVARLG GDEFAIVLGD LWQVADAEAV AAKIVDVITR PLEVRGHALR
VGGSVGVAVY PFQAHDEESL LRHADLAMYH AKESGGNRHQ LFSEQMNARA VERMTVESEL
RAAIAAGQLE LHYQPQLCLE DGRLAGMEAL VRWRHPRLGL LAPGRFVPLA EDCGLIWELG
LAVLELALAQ LAAWDRAGLE VPRIAVNVSP AQLRPELVER IVEILDRHGV AARRLEIELT
ESALTADGPA ANGLLQALRR MGASIAIDDF GVGYSSLTLL RRLPISALKI DRSFVAELAT
NRQDAAIVEA ILRMAHSVGL RTVAEGVEHA EQQAALGELG CQEVQGYLCA RPLEAKAASA
WLAGQHAGGL VPSAAAA
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