| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0158 |
|---|
| Symbol | |
|---|
| ID | 7085255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 182649 |
|---|
| End bp | 183692 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643697200 |
|---|
| Product | porin Gram-negative type |
|---|
| Protein accession | YP_002353849 |
|---|
| Protein GI | 217968615 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCC TTTCCGCGCC GGCCCTGGTG GCCGCCGCCC TCGCCCTGCC ATCGCTCGCG
CTGGCCCAAT CGAACGTCAC CCTCTACGGC CTGATCGACC TCAACCTCGG CTACGAGAAA
TCCGGCTCGC AGCGCTACGA GGGCATCGGC CACGGCGAGC TCAACGGCTC GCGGCTCGGC
TTCCGCGGCA CGGAGGATCT CGGCAACGGC AACAAGGCCC TGTTCGTGCT CGAGAGCGGC
TTCGACCCCT CGACCGGCGT GGCCGAGCAA GGCGGGCGGC TGTTCGGCCG CCAATCCTTC
GTCGGCCTGG AAAACGGCCT CGGCCGCGTG ACCCTGGGCC GCCAGTATTC CCCGGCCTTC
GACGCGCTCG ATCCCTTCGA CGCCACGGGC AACGCCGACC GCAGCGCCGG CCTGCTGATC
CGCAAGGCGG GCGCGGTCAA GCCCGCCTAC GAGACGCGCT TCGACAACAT GATCAAGGTC
CGCTCGGCGA AACTCGCCGG CTTCGAGCTC GAGGGCGGCT ACTGGTTCGG CAAGGAGAGC
GGAACCGACT CGACCGCGCG CCAGGAGGGC GACGGCCATG GCATCGCGAT GCTCTACGCC
AACGGCGCGC TCGCCGGCTC CCTGGTCACG CAGACCGTGC AGCGCGACGC CAGCGGCGGC
AAGGTGCGCA CCGACGGCTT CGCCCTGTCC TACGACTTCG GCATCGTGAA GCCCTATTTC
GCCTGGTCGC AGGACAAGGA GCGCGGCAGC GTGGGCAACG GCAAGGCGCG CAGCTGGGAC
CTCAGCGCGG AGATCCGCCT CGATCCGGCG AACACGGTGG CGATCAGCTA CGCCGACCGC
GACGAATCCG ACGGCGCCGC GAGCGAGGAC GCCAGCGGCT GGTCGGCCTA CTACCTGCAC
GCGCTGTCCA AGCGCACCAC GCTGTACGCC GGCTACTCGC AGCTCGACAA CGAGGTCGGC
GCCAACTACG CGATCGGCAA CCTGACGCCG GCCGCCGGCG ACAAGCACCA GGTGATGATG
GCGGGCATGC GCCACCGCTT CTGA
|
|---|
| Protein sequence | MQRLSAPALV AAALALPSLA LAQSNVTLYG LIDLNLGYEK SGSQRYEGIG HGELNGSRLG
FRGTEDLGNG NKALFVLESG FDPSTGVAEQ GGRLFGRQSF VGLENGLGRV TLGRQYSPAF
DALDPFDATG NADRSAGLLI RKAGAVKPAY ETRFDNMIKV RSAKLAGFEL EGGYWFGKES
GTDSTARQEG DGHGIAMLYA NGALAGSLVT QTVQRDASGG KVRTDGFALS YDFGIVKPYF
AWSQDKERGS VGNGKARSWD LSAEIRLDPA NTVAISYADR DESDGAASED ASGWSAYYLH
ALSKRTTLYA GYSQLDNEVG ANYAIGNLTP AAGDKHQVMM AGMRHRF
|
|---|
| |