Gene Tmz1t_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0152 
Symbol 
ID7085249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp176862 
End bp177797 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID643697194 
ProductAuxin Efflux Carrier 
Protein accessionYP_002353843 
Protein GI217968609 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.357013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATCA TCTTCGGCAT CATCCTGCCG GTCTTCGGCA CGCTTGGCCT CGGCTACGTC 
GCGGCGCGCT CCGGCGTGTT CGACGAGGCG GCCAACCGCG GGCTGTCCGT GTTCGTGTTC
AACTTCGCGC TGCCCTTGAT GCTGTTCCGC GCGATCGCGC AGGCCGAGCT GCCCGACGCG
ATGCCCTGGG GCTATCTGCT GTCCTACTAC ATCGGCGCCT TCGGGGTGTA TGCGCTGGCG
ATGCTGGGCG GGCGGGTGCT GTTCGGGCGC CGGCTCGGCG AGCAGGCGGT GCTCGGGCTG
GGGGCGGGCT TCTCCAACAC CGGGATGCTC GGCATTCCGC TGGTGATGAC CGCTTACGGC
CCGCCGGCGG CGCTGCCGCT GTTCGTGATG ATCGCCTGCC ACAGCCTGCT GATGCTGCCG
CCCACCACCG CGCTGATCGA GGCCGCGCAG GGCGCGCGCG AGGGGCTGGG GCCGATGTTG
CTCAAGCTCA CGAAGAGCGT GCTCGGCACG CCGATCATCT GGGGCCTGTC CTGCGGGCTG
GCGTTCGCGC TGCTCGGCAT CGACATCCCC GGTCCGCTCG ACGCCGTCGC GAAGGGCCTG
GGCAGCGCGG CGACGCCGTG CGCGCTGTTC GCGCTCGGCG CCTCGCTGAC GCGCTACAGC
CTGGGCGGCA ACCTGCGCGA GCCGGCGCTG CTGGTGGCGC TGAAGGCGGT GGTGCATCCG
GCGATCGTGT GGCTGCTCGC CACCCAGGTG TTCGCCGTGC CGCCGCTGTG GGTGGCCACC
GGCGTGCTGC TGGCGGCGCT GCCGGCGGGC ATCACGCCCT ATCTGTTCGC GCAGCGCTAC
GGCGCCTGCC AGTCCACCGT GGCCTCGGCG GTGTTCCTGT CGACCCTGGT GTCGGTGGGC
ACGCTGTCTG TGCTGCTCTT CGTGTTGCGG CCCTGA
 
Protein sequence
MDIIFGIILP VFGTLGLGYV AARSGVFDEA ANRGLSVFVF NFALPLMLFR AIAQAELPDA 
MPWGYLLSYY IGAFGVYALA MLGGRVLFGR RLGEQAVLGL GAGFSNTGML GIPLVMTAYG
PPAALPLFVM IACHSLLMLP PTTALIEAAQ GAREGLGPML LKLTKSVLGT PIIWGLSCGL
AFALLGIDIP GPLDAVAKGL GSAATPCALF ALGASLTRYS LGGNLREPAL LVALKAVVHP
AIVWLLATQV FAVPPLWVAT GVLLAALPAG ITPYLFAQRY GACQSTVASA VFLSTLVSVG
TLSVLLFVLR P