Gene Tmz1t_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0143 
Symbol 
ID7085241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp166628 
End bp167785 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID643697187 
Productamidohydrolase 
Protein accessionYP_002353836 
Protein GI217968602 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGC TTTTGCAAGA GTTGTCGACG AATCAGGAAG CGATGAAGAC CTGGCGTCAC 
CACATGCACC GCCACCCGGA GGTCGCGTTC GACGAGCACA AGACGGCCAG CTACATCGCC
CGGCTGCTGC GGGAGTGGGG ATACGAGGTC ACCGAAGGCG TCGGCAAGAC GGGCGTGGTG
GCCAGGATGC GCTGCGGCGA CAGCAAGAAG TCGATCGGCC TGCGTGCCGA TACCGACGCC
CTCGCCGTGC AGGAGGCGAA TGACAGCGAC CACAAGAGCA CCATCGAAGG CAAGTCGCAT
ACCTGCGGTC ATGACGGTCA TAGCGCCATG CTGCTGGGGG CTGCGCAGCA CCTGGCGCGT
ACTCGTGCGT TCAACGGCAC GGTGAACCTG ATCTTCCAGC CCGCCGAAGA AATCATGGGC
GGCGCGGTCG CCATGATCCA GGACGGTCTG TTCGAGCGCT TCCCGATGGA TGCGGTCTTC
GGCATGCACA ACATGCCCGC GCTGGAGCAG GGCAAGATGT ACTTCACCTC CGGCCCGCTG
TTCGCCGCGG TGGATAACTG GGAAATCGTG CTGACCGGTG TCGGCAGCCA CGGCTCGATG
CCCGAGAAAA GCATCGACCC GGTGGTGGCG GGAGCTTCCC TGGTCATGGC GCTGCAGACC
ATCGTCTCGC GCAACGTCGC GGCCAAGGAT TCGGCCGTGG TGAGCGTCGG CGCCTTCCTG
GCGGGCGATG CCGGCAACGT CATTCCGCAG ACCGCGACCC TGCGCCTGAG CACCCGCACC
AGCAAGCCGG AAACGCGTCA GCTGGTGCTC GCCAAGATCA AGTCCATCAC CGCGGCACAG
GCCGAGGCCT TCGGGGTCCG CTACGAAATC CGCGAAGGTT CGCCGGGTGC CGTGCTGGTC
AATGATCCCG CGCTGACCGA GGAGTGTGCC GACATCGCCC GCAAGCTGCT CGGCGAGGAT
CAGGTGGTGA TGCCCGGACC GACCTACATG GGCAGCGAGG ATTTCGCCTT TTTCGCCCAG
CTCAAGCCGA GCACCTACTG CATCATCGGC AACGGCGACA CCGCCATGGT TCACCATCCC
AAGTACGACT TCGACGACGA CAACCTGCCC GTGGGCGCCG CGTACTGGGT GGCGCTGACC
CAGCACCACC TGAAGTAA
 
Protein sequence
MSTLLQELST NQEAMKTWRH HMHRHPEVAF DEHKTASYIA RLLREWGYEV TEGVGKTGVV 
ARMRCGDSKK SIGLRADTDA LAVQEANDSD HKSTIEGKSH TCGHDGHSAM LLGAAQHLAR
TRAFNGTVNL IFQPAEEIMG GAVAMIQDGL FERFPMDAVF GMHNMPALEQ GKMYFTSGPL
FAAVDNWEIV LTGVGSHGSM PEKSIDPVVA GASLVMALQT IVSRNVAAKD SAVVSVGAFL
AGDAGNVIPQ TATLRLSTRT SKPETRQLVL AKIKSITAAQ AEAFGVRYEI REGSPGAVLV
NDPALTEECA DIARKLLGED QVVMPGPTYM GSEDFAFFAQ LKPSTYCIIG NGDTAMVHHP
KYDFDDDNLP VGAAYWVALT QHHLK