| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0138 |
|---|
| Symbol | |
|---|
| ID | 7085236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 163813 |
|---|
| End bp | 164268 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643697182 |
|---|
| Product | protein of unknown function DUF107 |
|---|
| Protein accession | YP_002353831 |
|---|
| Protein GI | 217968597 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA CGATGTTCCT CGAATGGTGG CACTGGGAGA TCGCCGGCAT CGCGCTGGTG
CTGCTCGAGC TTGCCCTGCC CTCCTTCTTC ATCATCTGGT TCGGGCTCGG TGCGATGCTC
ACCGGATTCG TGCTGCTCGC GATGCCGGAC CTGGCGCTGT CGCAGCAGAT CGCGGTCTGG
ATCATCGCCT CGATGGCGAT GACCGTGCTG TGGTTCAGCT TCGCGAAGCG CGCGCGCGTC
AGGACCCTGA TCGGCACCGC CGCCGGCGAG GTGATCGGGG AAGTGGGCCT GCTGGTGAGC
GCGGTCGCGC CCTTCGAGCG CGGCAAGGTG CGCTTCCAGC GCCCGGTGCT CGGCGCCGAC
GAATGGGCCT GTGTGGCCGA GAGCGCGATC GCGGCCGGCG AGCGCGTGAA GGTGGTGAGC
GTGGAGGGCA GCTACGTCAA GGTGACGAAG GCCTGA
|
|---|
| Protein sequence | MNDTMFLEWW HWEIAGIALV LLELALPSFF IIWFGLGAML TGFVLLAMPD LALSQQIAVW
IIASMAMTVL WFSFAKRARV RTLIGTAAGE VIGEVGLLVS AVAPFERGKV RFQRPVLGAD
EWACVAESAI AAGERVKVVS VEGSYVKVTK A
|
|---|
| |