| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0135 |
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| Symbol | |
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| ID | 7085233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 160792 |
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| End bp | 161529 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643697179 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002353828 |
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| Protein GI | 217968594 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.911961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCG AACGCCTCCT CCACGCCCAG GGCTTCGGCA GCCGCAAGGA TTGCCGTGCC
CTCATCCGTG CCGGCTACGT CAGCGTCGCC GGCGAAGTCT GCGACGACCC CACCGAGGAG
TTCGACCCCG GCAGCCGCGA TGGTTCGCCC GGGCTCGAAT TCACCGTCGA TGATCAACCC
TGGCGCTTCC GCGCCCAGGC CTACGTGGTC CTGCACAAGC CTGCAGGCTA CGAATGCTCG
CAGAAGCCGA CCTTCCATCC CTCGGTGTTC ACCCTACTGC CACCGCAGCT GCTCGCCCGC
GGCGTGCAGT GCGTGGGCCG GCTCGACCAG GACACGACCG GCCTGCTGCT GCTCTCCGAC
GACGGCCAGT TCATCCACCA GTGGAGCTCG GGAAAGAAGC GTACGCCCAA GGTCTATGAG
GTGACGCTCA AGCATGCGGT GGAACAGGAC TTCGCCGACC GGCTGGTCGC CGGCGTCGAA
CTGAACGACG AGCCCGTTCC GATCGCGGCT GCGGCGTGCG AGCTGCTCAG TCCGACCACG
CTGCGGCTGA CGATCTGCGA GGGCAAGTAT CATCAGGTCA AGCGCATGGT CGGCGCCGCC
GGCAACCGTG TCGAGGTGCT GCACCGCAGC CGCGTGGGCG GGCTCGACCT GCCGGCCGGG
CTGGCGCCCG GGCAGTGGCG CTGGCTCGAG GCCGAGGACC TGGCCCGCCT GGCCGACTAC
GCCGACGCGA CTTCCTGA
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| Protein sequence | MQLERLLHAQ GFGSRKDCRA LIRAGYVSVA GEVCDDPTEE FDPGSRDGSP GLEFTVDDQP
WRFRAQAYVV LHKPAGYECS QKPTFHPSVF TLLPPQLLAR GVQCVGRLDQ DTTGLLLLSD
DGQFIHQWSS GKKRTPKVYE VTLKHAVEQD FADRLVAGVE LNDEPVPIAA AACELLSPTT
LRLTICEGKY HQVKRMVGAA GNRVEVLHRS RVGGLDLPAG LAPGQWRWLE AEDLARLADY
ADATS
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