Gene Tmz1t_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0108 
Symbol 
ID7085206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp125517 
End bp131153 
Gene Length5637 bp 
Protein Length1878 aa 
Translation table11 
GC content70% 
IMG OID643697155 
Producthypothetical protein 
Protein accessionYP_002353804 
Protein GI217968570 
COG category[S] Function unknown 
COG ID[COG4995] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATC AGCCCAAAGT CACCATCGTC CGCATACCGG GTCGGGTGCG GCCCGACGAA 
CCGCTTCGGC TTGCGAGCTG GATCGGGGGT GATTCGCCCT TGTTCGCCGG TGTGGCGCCG
GCGCGTTCCT TTCGCCTCGG CGCGACCGGC AGTCGCGGCA CGGCCGAAGA CACGGTCGCC
GAGGCGATTC CCGAGGACGC CCTGGTCGAG ATCGAGTTCG AAGGCGGCGC ATGTTTCTGG
ACCGTGGGCG CGGATCTGCG CAAGCGCCTG CAGGAGGCGG GCGGCGCCAG CGCACGGGGT
GGAAGCGGCG CGGACGATGG CGCCTGGGAT CTGCCGTCCA GCATCGCCGC GCCGGTCACG
GGTACGCGCG GGCTCGCCGG GAAACTGACC ATCCGGGCCC TGCGCTGGAT GGGCTTCGAT
CCGGTGAAGG CGGGTCTGGA CAAGATCGTC GACCTGGCCG AGACACGCTC GGTGCCGCGC
GAAGGGGTGT TTCTCGTGGG CGACGACGGC ATCCGGGGCG AACCCCTGAA AACGCCGATT
CCCGATGGCG AGCGCACCCT CATCCTGCTT CACGGCACGG CATCGAACAC GCGCGGCAGC
TTCTCCAAGC TGTGGCTGCG CCAGCCCAAA CAGTGGGCGC GCCTGCGCGC ATGCTACGGC
GAGCGCATCT TCGCGCTCGA GCACTGCACC CTGACCCGCA GCCCGATCGA GAACGCGCTC
AAGCTCGCGC GCCTGCTGCC ACGCAGCGGT TCGCTGCGCC TCCTGTCGCA TTCCCGTGGT
GGCCTGGTCG GCGAACTGCT CGCGCTGGAT CCGGCTCGCG TCGATCGCGC CGGCATCACC
GCGGTGCTGG CTGCAGCGCA GCGGGAGAAT CCGCCTGCGG CGGAGGCGCT GATGCAGCAG
GAGGCACAGC TCTTCGCGCT GCTGCGCGAA CTCGAGGCGC GCCCGGCGCT GCAGATCGAG
CGTTTCGTGC GCGTGGCCTG CCCGGTCATC GGCACCTCCC TCGCCGGGGA GAAGCTCGAC
CAGTGGTTCT CGCTGCTGGT GCTGGCCGCG ATCGCCGACG AGATGCGCCG CAGCAACAGC
CGCGGCATGA TCACGAGCGG GCTCGCCTCC CTCGCCAGCC ATGGGCTGGA CATGCTGGCG
GAAACCGCGG CGGCCATCAT CGGCAGCCGC AAGCGGGCCG ACCAGTTGCC CGGCCTCGAG
GCGCAGATGC CCGGCTCCGC GCTGGTCCGC ATCCTCAACG GAAACCCGGG ACGCGGAGAA
CTGTTCGTCG TCGCGGGCGA CGCCGCCCCC CGGGAACAGG ACTGGCTGGC CGAGCTGCGC
TTCTGCCTGA TCGACCGCTA CTTCGAGCAG GACCACGACC TCGTGGTCGA CACGCGCGCC
ATGCTGGACG GCCCCGACCG CCCGGTACGC AAGGTGTTCT TCCGCGCCGG CCCGACCGTC
AATCACTTCA GCTACTTCGG TAACGAGGAC AGCGCAGCCG CGGTCGCCGC CGCGCTGACC
GACGCCGTCG ACACCGCCAC GCTGTTCCAC GACTACGCAG GGGAATGGCC CCTGCCCGCC
GAGACCGCGC GCGGCCTCTT CGCACCGCGT GCGCTCGCCG ACCCCCCGCT CCAGGGCGCG
CGAGGCATCG TGGTGCTCGT ACCCGGCCTG TGCGGCTCCG AACTCCAGGT CGCCGGCCGC
GAAGTGTGGG CGAGCGTGCC GGCCCTGGCC TGCGGCGGCT TCCGCAAGAC GCTGCGCATC
GACAATCCGG CGGTCGAGCC GGGCGATCCG CTGGCCGGCA GCTACCTCGC GCTGGCCAAT
GCGCTGCGCA GCAGCGGCTA TGTCGTACGC ATGCATGGCT ACGACTGGCG CAAGTCCGTC
GTCGACTCGA TCAAGGGGCT CGGCGACACC CTGTCCACCG CGCTGGGCGA TGCCACGGCG
GGCAAGCTGC CGGTGCACGC GATCGTCCAT TCGATGGGCG GCGTGCTGAT CCGCGCCGCC
TTCGCCCAGG ACCGCGGGCT CTGGAAGCGC TGGAAGGAAC AGCCGCGCCC CGAGGCGCGC
GTCATCATGC TCGGCACGCC CAACCAGGGC TCGCACGCGG TGACGCTGCT GCTGACCAAG
CGCGACGAGT TCTTCGCCAA GCTGGCGATG CTCGACCTGC ACAACTCCGA GCGCGAGCTT
CTCGAGATCG CCCAGCACTT CCCCGGTGTG CTCGAGCTGC TGCCGAACGC CGCCGATGAA
AACGGCGAGG AGATCCGCCT GCCCGCGACC TGGCAGCGCT ACTGCACCGC CGACGGCCAA
CGCTGGCCCG TTCCGCCGGA GGCTGCGCTC ACCCAGTCCG GAGAACTGTG GCGGACGCTG
CTCGCAGGCG ATCCCCTGAT CGACGACGAG CGCCTGATCT ATGTCGCCGG CACGGCGAAG
GAAACGCCCC GCCTCGCCGA GATCGCCGAG GACGGACGGT TCCGCCTGCT CAAGACGGCC
GACGGCGATG GCCGCGTCAC CTGGGCAAGC GGAATCCCCG CGAAGTGCCG GGAAGGCGGA
CGGCTCTACT ACATGAACGC GGTGCATGGC GACATGCCGG CGCACACGCC GGCCTTCCCG
GCATTGCAGG AGCTGCTGGA GAAGGGCGAG ACCGGGCGCT CCGCGCTGAC GCGCAAGCCC
GTCCCCATCC AGGCCCGCGG CGCCGTCGAA GCCCCCGGGG AATATGCCCC CGTCAGCCCG
GCCATGCTTT CACACTACCC GACGCGCTCC GACCTGCTGG CCGCGGCGAC CGGCGCCACG
CTCCGCGCCC CCCGCACCGA GCGCGAGGAG GAGATGCGGA CGCGGGTCCG GGTCATTCAC
GGCGACCTGA TCTTCGTCGA CGCACCGGTT CTGGTCGGCC ACATACAGGG CACCAACAAT
CTCGAGCAGG CGGAATACAT CCTCGACCGC GCCCTCAACG GTCGCATGCA GAACCGCCTG
GATGCCGGCA TCTATGCGGG CCCGCTGGGC AGCTATGCCC TCTTCCCACC CCAGCCCGAG
GAGCGCTTCG CCGCCGGCGC CATCGTCATC GGCATCGGCC GCGTCGGCGA GCTCTCGCCG
GGAAGCCTGT GCGACGGCGT GGCGCGCGCG CTGGTCGCCT ATGCGATCAC GCGGCACGAG
GAGCGCAAGC GCACACACGA CCGGCAGGCC GCCACCGCCG GCAAACCGCT GCAGTTGCCG
GTGTGTGCGC TGTTGATCGG TGCGGCGATC GGCGAGCTGA GCCTGCGCGA TTCGGTCACC
GCCATCCTGC GCGGCCATCG CAAGGCGCGC GAACGCCTCG CCGACGCGAA GCTCGACGAC
CGCATCGAGT TGACGCAGCT GGATTTCGTC GAGCTGCTGG AGGACCGTGC GATCCAGGCG
CTCAACGCGG CACGCGACGC GGTGACGCTC GACGGCGAGC TGCGCAGGCA TTTCTGCATC
GAGGACACGC TGGCGAAGAA CGAGGGCGGG CGCCAGCGTG CCTACGCCGA GCTCGGCGAA
GATGCATGGA CCCGGATCGC GATCAGCGCC GTCAGGATCG CCGACGGCAG CGGCACCCAG
CTGCTGTTCA ATGTCCATGG CGACCTTGCG CGGACCGAGC AGCTCTACAA CGGCATTGCG
CTCGGCAGCA TCGAGCGCTT CACCCGCCAG CTGATCGACA CGGAAAGCGA CAACGAGGAA
GTCGGCCGCA CCCTGTTCGA ACTGCTTCTG CCCAACTGGC TGAAGGACCA GGCACCGGAC
CGCCGCCGCG CCCAGCTCAT CATCGATTCG GCCGTCGCCG GCATTCCCTG GGAGTTGCTG
CGCGATCGCA TGGAAGACGA CCGCAGCGAT CGCGGCGGCG CCCCGCTGTC GGTGCGCAGC
GGCCTCGTAC GCCAACTCTC GACGGGCCGC TTCCGCCAGC GCATCCAGCG CGCGGACGGC
TTTCACGCGC TGGTCGTGGG CGATCCGGAC CTCGGGCGTC TGGGCGACTA CTTTCCGCAG
CTGGCCGGTG CGCGCGAAGA AGCCGCCGAG GTGGCCCAGC TGCTCAAGGA CGGCGGCTTC
GACACGCCGC CCGCGCTGCT CGGTGGCAGT GCCGAGCAGA TCCAGATCGC GCTCTACCAG
CGCGACTGGC GCATCCTTCA CCTGTCGGGC CATGGCATCT ATCGTGAAAC CCTGCCGACG
ATCGATGCCG ACCACAGCGC CAAGCCGGCC GACGAGGCCG TCACTGCGAC CGGCATGCTG
ATCGGCGAGA ACAGCGTGCT CACCACCGCG CACATCGAGC AGATGCGGGT GGTACCCGAT
TTCGTGTTCA TCAACTGCTG CTCCCTCGGT CGCATCGAGG CCGAGCGCGC GATGCTCGGC
GAGAACCGGC CCGGCAATCC GATGCTCGCC GCCAACCTCG CGACCCAGTT GATCGAGATG
GGCGTCCGTG GCGTCATCGC CGCCGGATGG CGGGTACTGG ACGACGCGGC GAAGCTGTTC
GCCAGCACCT TCTACGAAGC CTTCCTTGCC GGCGAGACCT TCGGCGAGGC GGTGCTCGCC
GCCCGCCGGG CCACTTTCGA CCGCTTCCCC ACCACCAACA CCTGGGGCGC CTACCAATGC
TACGGCGACC CCAGCCTGCT GCTGCGGCGG CCGCCAAGCA GCCACGAGCG CCGCCGCCAT
GCCGCACGCT ACGACTTCGT CGCACCGCGG GAGGTGATCG CCGAACTGGA GCGCCTGACC
CAGCAGAGTC GCTACCAGGC CATGGAATCC GCCGACGACC GCAAGCGTCG CGAGGAGCGC
ATCGACGCGC TCGCGAGGCT GTGCGAGCGG CGCGGATGGT CGGGGCATGG CGACATCCAG
GAGGCCTTCG GGCAGCTGTG GGCGGAATTC GGCGACCATG ATCGCGCCAT CGCCTGCTAC
CGGGCAGCCC AGGGGGCCGG GGACGGCAGC GCCTCGATGA AGGCCACCGA GCAACTCATA
AACATGCTCG CGCGACGGGG CAGCGGCCTG CTCGCGGCGG GCGGGCCCGA GGCCATGGCA
AAGGGCAAGG CCCTGCTCGG CGAGGCCGAG CAGCTCATCA CCGGAGTGCT CGCCGTCGCT
CCGAATGCCG AACGTCACTG CCTGCTCGGC AGCATCTGGA AGCGCAAGCT GAAACTCACC
GCCGACAACC AGCTGGATGC AGCGCTGAAG AGCATGGCAC AGGCCTACCG CAACGCCGAA
AACTGTGCCC TCGAGGCGGG CGGGCGGCTC TACTACCCGG CGCTCAGCGT CCTCCATGCG
GACCTGCTGC GCCAGCTGCT CGGCACCCTC ACCCCGGACG AGGGCAAGGC GGCACGGCAA
CGCATCGCCG CCGTGCGCAA GGAGATCGAG GACCCGGCAT TCCAGGCGCG CGACTTCTGG
GATCGTGTCG CACCCCTCGA CCTCGCCCTG AGCGAAGCCT TGTTCGACAC CGCCTGCGAA
GAAAATGCGG ATCGCCAGGC GAATGATGCG AGCTTCAGCA AGGCACAGGA GGAGTACCAG
GCCTTGCTCG CCTACAGCTC ACGCCGCGAA CGGGAGTCGG TCGTCGGTAC GCTGGACGCG
CTCAAGACCT TCCTGGAACG CCTGCCAGCG CAGCGAAAAG GCGCTCATTT CGCCCGCGCG
AGGGAGCTGG TCGGTCGCCT GAACACCCTG GCCGACGCCT TGCGAAAGTT GCTGTGA
 
Protein sequence
MSNQPKVTIV RIPGRVRPDE PLRLASWIGG DSPLFAGVAP ARSFRLGATG SRGTAEDTVA 
EAIPEDALVE IEFEGGACFW TVGADLRKRL QEAGGASARG GSGADDGAWD LPSSIAAPVT
GTRGLAGKLT IRALRWMGFD PVKAGLDKIV DLAETRSVPR EGVFLVGDDG IRGEPLKTPI
PDGERTLILL HGTASNTRGS FSKLWLRQPK QWARLRACYG ERIFALEHCT LTRSPIENAL
KLARLLPRSG SLRLLSHSRG GLVGELLALD PARVDRAGIT AVLAAAQREN PPAAEALMQQ
EAQLFALLRE LEARPALQIE RFVRVACPVI GTSLAGEKLD QWFSLLVLAA IADEMRRSNS
RGMITSGLAS LASHGLDMLA ETAAAIIGSR KRADQLPGLE AQMPGSALVR ILNGNPGRGE
LFVVAGDAAP REQDWLAELR FCLIDRYFEQ DHDLVVDTRA MLDGPDRPVR KVFFRAGPTV
NHFSYFGNED SAAAVAAALT DAVDTATLFH DYAGEWPLPA ETARGLFAPR ALADPPLQGA
RGIVVLVPGL CGSELQVAGR EVWASVPALA CGGFRKTLRI DNPAVEPGDP LAGSYLALAN
ALRSSGYVVR MHGYDWRKSV VDSIKGLGDT LSTALGDATA GKLPVHAIVH SMGGVLIRAA
FAQDRGLWKR WKEQPRPEAR VIMLGTPNQG SHAVTLLLTK RDEFFAKLAM LDLHNSEREL
LEIAQHFPGV LELLPNAADE NGEEIRLPAT WQRYCTADGQ RWPVPPEAAL TQSGELWRTL
LAGDPLIDDE RLIYVAGTAK ETPRLAEIAE DGRFRLLKTA DGDGRVTWAS GIPAKCREGG
RLYYMNAVHG DMPAHTPAFP ALQELLEKGE TGRSALTRKP VPIQARGAVE APGEYAPVSP
AMLSHYPTRS DLLAAATGAT LRAPRTEREE EMRTRVRVIH GDLIFVDAPV LVGHIQGTNN
LEQAEYILDR ALNGRMQNRL DAGIYAGPLG SYALFPPQPE ERFAAGAIVI GIGRVGELSP
GSLCDGVARA LVAYAITRHE ERKRTHDRQA ATAGKPLQLP VCALLIGAAI GELSLRDSVT
AILRGHRKAR ERLADAKLDD RIELTQLDFV ELLEDRAIQA LNAARDAVTL DGELRRHFCI
EDTLAKNEGG RQRAYAELGE DAWTRIAISA VRIADGSGTQ LLFNVHGDLA RTEQLYNGIA
LGSIERFTRQ LIDTESDNEE VGRTLFELLL PNWLKDQAPD RRRAQLIIDS AVAGIPWELL
RDRMEDDRSD RGGAPLSVRS GLVRQLSTGR FRQRIQRADG FHALVVGDPD LGRLGDYFPQ
LAGAREEAAE VAQLLKDGGF DTPPALLGGS AEQIQIALYQ RDWRILHLSG HGIYRETLPT
IDADHSAKPA DEAVTATGML IGENSVLTTA HIEQMRVVPD FVFINCCSLG RIEAERAMLG
ENRPGNPMLA ANLATQLIEM GVRGVIAAGW RVLDDAAKLF ASTFYEAFLA GETFGEAVLA
ARRATFDRFP TTNTWGAYQC YGDPSLLLRR PPSSHERRRH AARYDFVAPR EVIAELERLT
QQSRYQAMES ADDRKRREER IDALARLCER RGWSGHGDIQ EAFGQLWAEF GDHDRAIACY
RAAQGAGDGS ASMKATEQLI NMLARRGSGL LAAGGPEAMA KGKALLGEAE QLITGVLAVA
PNAERHCLLG SIWKRKLKLT ADNQLDAALK SMAQAYRNAE NCALEAGGRL YYPALSVLHA
DLLRQLLGTL TPDEGKAARQ RIAAVRKEIE DPAFQARDFW DRVAPLDLAL SEALFDTACE
ENADRQANDA SFSKAQEEYQ ALLAYSSRRE RESVVGTLDA LKTFLERLPA QRKGAHFARA
RELVGRLNTL ADALRKLL