Gene Tmz1t_0089 details

Gene Information

• Locus tag: Tmz1t_0089
• ID: 7083472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 100492
• End bp: 102423
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643697136
• Product: Radical SAM domain protein
• Protein accession: YP_002353785
• Protein GI: 217968551
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCCG CGCCGCCCTC CGCCCACCCG ATCCGCGTGC TCTCCGTCAT CCCGCCGATG 
ACGCAGCTCA ACACGCCCTA CCCGTCCACC GCCTACCTCA CCGGCTTCCT GCGCTCGCGC 
GGGGTGGATG CGGTGCAGGA AGACCTGGCG CTGAAGCTGG TGCTGCGCCT GCTCTCGCCC 
GCCGGGCTGG ACGACATCCG CGCCCGCGCC GAGGCGCTGC CGAAGAAGCG GCGCACGCCG 
CTGGTACAGG GCTTTCTCGA CCACTTCGCG CGCTACCGCT ACACCGTCGA CCCCACCATC 
GCCTTCCTGC AGGGTCGCGA CCCGACCATC GCGCACCGCA TCGCCAGCCG GACCTTCCTG 
CCCGAGGGGC CGCGCTTCGA TGCGGTGGAC GCCTACGTCG ACCCGGACGA CCCCGAGGGC 
GGCGACCCGC TCGCCTGGGC CTTCGGCGCC CTCGGCCTCG CCGACCGCGC GCGCCACCTG 
GCGACGCTGT ACCTCAACGA GCTCGCCGAC ATCCTGCGCG ACGCGGTGGA TGCGCGCTTC 
GAGTTCGTGC GCTACGCCGA GACGCTGGCG ATGAGCCAGC CCACCTTCGA GCCGCTCGCC 
GCCGCGCTTG CCGCCGCACC GACGCTGGTC GACGCGTATT TGAAAGACCT GACCCTCGAA 
GCCCTCTCCC GCCACTCGCC GCAGGTGGTG CTGGTCTCCA CCCCCTTCCC GGGCTCGGTG 
TACGGCGCCT TCCGCATCGC GCAGGCGATC AAGGCCGCGC ATCCGGAGAT CGTCACCGTG 
CTCGGCGGCG GCTTCGTCAA TACCGAGCTG CGCGAGCTCG CCGAGCCACG GGTGTTCGAC 
CATTTCGACT ACGTCACGCT CGACGACGGC GAGCGCCCGC TGCTCGCGCT GCTCGAGCAC 
CTGCAGGGCC GGCGCGGCAG ATCCCGGCTG GTGCGGACCT TCGTGCGCGA TGCGGATACG 
GGCCAGGTGC GCTACATCAA CCTCGCCGAG CCCGACGTGC CCTTCGCCGA GGTCGGCACC 
CCGACCTGGG ACGGCCTGCC GCTGGACGGC TACCTGTCGG TGCTCGACAT GCTCAACCCG 
ATGCACCGCC TGTGGTCGGA CGGGCGCTGG AACAAGCTCA CCGTGGCCCA CGGCTGCTAC 
TGGAAGAAGT GCAGCTTCTG CGACGTCAGC CTCGACTACA TCGGCCGCTA CGACGGCGCC 
GCCGCCGGCC TGCTGGTCGA CCGCATCGAG GCGATCATCG CCGAGACCGG CCAGACCGGC 
TTCCACTTCG TCGACGAGGC CGCGCCGCCC AAGGCCTTGC GTGCGCTCGC CGAGGAGCTG 
CTGCGGCGCG GCTTGGCGAT CTCGTGGTGG GGCAACATCC GCTTCGAGAA ATCCTTCAGC 
CCCGAGCTCT GCCAGCTGCT CGCCGACAGC GGCTGCATCG CGGTCTCGGG CGGGCTGGAG 
GTGGCCTCCG ACCGCCTGCT GCAGCTGATG AAGAAGGGCG TTTCGGTCGA GCAGGTCGCG 
CGCGTCACCC ACGCCTTCAC CGCGGCCGGG GTGCTGGTGC ACGCCTACCT GATGTACGGC 
TTCCCCACCC AGACGGTGCA CGACACCGTC GACGCGCTCG AATACGTGCG CCAGCTCTTC 
GAAGCCGGCT GCATCCAGTC GGGCTTCTTC CATCGTTTCG CATGCACCGT GCATTCTCCG 
GTGGGCAGGA ACCCGGAGGA GTTCGGCGTC ACCCTGGTGG CGCTGCCCGA GATCACGTTC 
GCGAAGAACG ACGTCGGCTT CATCGACCCC ACCGGGGTGG ACCACGACCG CCTCGGCAAG 
GCGCTCAACA AGGCGCTATA CAACTACATG CACGGCATCG GCCTGGACAC CGACGTGCGC 
GCCTGGTTCG AGGACAAGGT GCCGCGCCCG CGCGTGGCCA GGCACTTCAT CGCCCGCGCA 
CTGGGCGCCT GA 

 

Protein sequence

MSAAPPSAHP IRVLSVIPPM TQLNTPYPST AYLTGFLRSR GVDAVQEDLA LKLVLRLLSP 
AGLDDIRARA EALPKKRRTP LVQGFLDHFA RYRYTVDPTI AFLQGRDPTI AHRIASRTFL 
PEGPRFDAVD AYVDPDDPEG GDPLAWAFGA LGLADRARHL ATLYLNELAD ILRDAVDARF 
EFVRYAETLA MSQPTFEPLA AALAAAPTLV DAYLKDLTLE ALSRHSPQVV LVSTPFPGSV 
YGAFRIAQAI KAAHPEIVTV LGGGFVNTEL RELAEPRVFD HFDYVTLDDG ERPLLALLEH 
LQGRRGRSRL VRTFVRDADT GQVRYINLAE PDVPFAEVGT PTWDGLPLDG YLSVLDMLNP 
MHRLWSDGRW NKLTVAHGCY WKKCSFCDVS LDYIGRYDGA AAGLLVDRIE AIIAETGQTG 
FHFVDEAAPP KALRALAEEL LRRGLAISWW GNIRFEKSFS PELCQLLADS GCIAVSGGLE 
VASDRLLQLM KKGVSVEQVA RVTHAFTAAG VLVHAYLMYG FPTQTVHDTV DALEYVRQLF 
EAGCIQSGFF HRFACTVHSP VGRNPEEFGV TLVALPEITF AKNDVGFIDP TGVDHDRLGK 
ALNKALYNYM HGIGLDTDVR AWFEDKVPRP RVARHFIARA LGA