Gene Tmz1t_0078 details

Gene Information

• Locus tag: Tmz1t_0078
• ID: 7083461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 87799
• End bp: 89730
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 643697125
• Product: ABC transporter related
• Protein accession: YP_002353774
• Protein GI: 217968540
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components
• TIGRFAM ID: [TIGR02204] ABC transporter, permease/ATP-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.503479
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAGCG ACACCGCCTC CCCCGCCCCG CTCTCCGCCC TGCGTGGCCT GCTCCCCTTC 
CTGCGCCCCT ACCGCGCACG GGTGGTGCTC GCCTTCGTGT TCTTGTGCCT GGGCTCGGCG 
GCCATCCTGG TGGTGCCGCT GGCCTTTCGC GACCTGATCG ACGCGGGCTT CGGCGGCGTG 
TCCGGCGGTG GTGCCGCGAC GGGCGGGGCG GCGGACGGCG GCGGGCTGTT TGGCGCGCAG 
GGGCTGGACG GACGTTTCGT CGCGCTGTTC GGCCTCGCAG TGTTCTGGGC GGCGGCGGTG 
GCCGCGCGCT ACTACACGGT GTCGTGGATC GGCGAGCGCG TCACCGCCGA CCTGCGCAGC 
GCGGTGTATG CGCGCGTGCT GCGCCAGTCG CCGCAGTACT TCGAGACCCT GCAGACCGGC 
GAGGTGCTGT CGCGGCTCAC CGGCGACACG ACGCTGGTGC AGACGGTGGT GGGCAGCTCG 
ATCTCGCTGG GGCTGCGCAG CCTCTTCCAG TTCGTCGGCG GCATGTTGAT GCTGGCGGTG 
ACCAGCGTGC AGCTCTTCGG GCTCATCTTC GGGCTCATGG CCCTGCTCGC GCTGCCCATC 
ACGCTGATCG GCCGGCGCGT GCGCAGCCTC TCGCGCGAGG CGCAGGACCG CATCGCCGAC 
GCCTCGGCGC TCGCCGGCGA GATCCTCGCG GCCATGCCCA CGGTGCAGGC CTTCGGGCAG 
GAGGACAACG AGGCCGCGCG TTTCGCCGCC CGCGCCGAGA CCAGCTTCGC CGCCGCGGTG 
CGGCGCACCC GGGTGCGCGC GGCGCTCACC GGGCTGATCA TCGCCGCGGT GATGGGCACG 
ATCATCTTCG TGCTGTGGAT CGGCGCGCGC CAGGTGCAGG CCGGCGCGCT GTCGGTGGGC 
GATCTCGGCG CCTTCGTGAT CTACGCCGCG CTGGTCGCGG GCGGCGCCGG CACGCTTGCC 
GAGGTGTGGG GCGACGTGAT GCGCGCCGCG GGAGCGAGCG GGCGGCTGCT GGAGCTGCTG 
CAGGCAGAGC CGGTGATCCG GGATGCAGAG GCGGCGGAGG GCGTAGCGGA GGCGGCCGGA 
GGTGGCGGTT CGCGACGGGC GCCGCGCCTG CATGAGAACC CGCGCAGCAC GCGCCCTGCG 
GGCGCGGCGC CCGCCGCGAA CCCCGCACCC GATTCCCCCA CCAAGGCCCC TGCCACCCAC 
CCCGCGATCG AACTCGCCGA CGTCGTCTTC CGCTACCCTG CCCGCCCCGC CGTAGCGGCG 
CTCGACGGCA TCGACCTGCG CATCGCAGCG GGGGAAAAAG TGGCGCTGGT CGGCCCCTCG 
GGCGCCGGCA AGACCAGCCT GTTCCAGCTC CTGCTGCGCT TCTACGAGGC CGGCGAGGGC 
TGCATCCGCA TCGACGGCCA CGACATCCGC GCGCTGCCGC TGCGCAGCCT GCGTGCGCGC 
ATTGCCATCG TGCCCCAGGA CCCGGTGATC TTCTCCGCGA GCGCGCTCGA CAACATCCGC 
TACGGTCGCC CCGACGCAGG CGACGCCGAG GTGATCGCCG CCGCGCGCGC CGCGGCCGCC 
GACGAGTTCA TCGCCCGCCT GCCCGAGGGC TACGCCACTT TCCTCGGTGA GCGCGGCACG 
CGGCTGTCGG GCGGCCAGCG CCAGCGCATC GCGATTGCGC GCGCGATCCT CAAGGGCGCC 
CCCATCCTGC TGCTCGACGA GGCCACCAGC GCGCTCGACG CCGAAGCCGA GGTCCTCGTG 
CAGCAAGGCC TGGCCGCCGC GATGCAGGGC CGCACCACGC TGATCATCGC CCACCGCCTC 
GCGACGGTGC AGAAGGTGGA TCGCATCGTG GTGATGGACG CGGGGCGCAT CGTCGAGACC 
GGCACCCCGG CCGACCTGCG CCGCCAGGGC GGGCTGTATG CGCGGTTGGC GGCGCTGCAG 
CTGGAGGGCT GA 

 

Protein sequence

MPSDTASPAP LSALRGLLPF LRPYRARVVL AFVFLCLGSA AILVVPLAFR DLIDAGFGGV 
SGGGAATGGA ADGGGLFGAQ GLDGRFVALF GLAVFWAAAV AARYYTVSWI GERVTADLRS 
AVYARVLRQS PQYFETLQTG EVLSRLTGDT TLVQTVVGSS ISLGLRSLFQ FVGGMLMLAV 
TSVQLFGLIF GLMALLALPI TLIGRRVRSL SREAQDRIAD ASALAGEILA AMPTVQAFGQ 
EDNEAARFAA RAETSFAAAV RRTRVRAALT GLIIAAVMGT IIFVLWIGAR QVQAGALSVG 
DLGAFVIYAA LVAGGAGTLA EVWGDVMRAA GASGRLLELL QAEPVIRDAE AAEGVAEAAG 
GGGSRRAPRL HENPRSTRPA GAAPAANPAP DSPTKAPATH PAIELADVVF RYPARPAVAA 
LDGIDLRIAA GEKVALVGPS GAGKTSLFQL LLRFYEAGEG CIRIDGHDIR ALPLRSLRAR 
IAIVPQDPVI FSASALDNIR YGRPDAGDAE VIAAARAAAA DEFIARLPEG YATFLGERGT 
RLSGGQRQRI AIARAILKGA PILLLDEATS ALDAEAEVLV QQGLAAAMQG RTTLIIAHRL 
ATVQKVDRIV VMDAGRIVET GTPADLRRQG GLYARLAALQ LEG