| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0072 |
|---|
| Symbol | |
|---|
| ID | 7083455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 80573 |
|---|
| End bp | 82225 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643697119 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_002353768 |
|---|
| Protein GI | 217968534 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAGA AATTCCCCGC CTTCGCCGGC GTCCAGGGCC CTGTCGTCGT CATCGTGATG
GACGGCTACG GCATTCCCAG GCACGAGGTC GGCAGCGCCA TCGACGCCGC GCGCAAGCCC
ACGCTCGACC GCCTGTTCGC CCAGTACCCC AACATCGTGC TGCGCGCCCA CGGCACCGCG
GTGGGCATGC CGTCGGACGA CGACATGGGC AACTCCGAGG TCGGCCACAA CGCCATCGGC
GCCGGCCAGG TGTATGCGCA GGGCGCGGCA CTGGTCGCCA ACGCGATCGC CGAAGGCGCG
ATCTGGCAGG GCGAGGCCTG GCAGCAGATC GTCGCCGGCG CCAAGACGGG AGCCAACGGA
AAAGCAGGGG TGCTCCACTT CATCGGCCTG TTCTCCGACG GCAACGTGCA CAGCCACATC
GACCATCTCA AGGCGATGGT GCTGCGCGCG AAGGAGGAGG GCGTGCCCAC GGTACGCATC
CACGCCCTGC TCGACGGCCG CGACGTGCCC GAGACCAGCG CGCTCGACTA CGTCGTGCCC
TTCGAGGCCT TCCTGAAGGA CATCAGCACT GCCGGCTTCG ACGCCCGCAT CGCCTCCGGC
GGCGGCCGCC AGACCATCAC CATGGACCGC TACGACGCCA ACTGGCCGAT GGTGGCACGC
GGCTGGCGCA CCCACGTGCT GGGCGAAGGC CCGCAGTTCG CCAGCGCCAC CGACGCGGTG
CACGGCCTGC GCGAGAAGCA CCCCGGCACC ATCGACCAGG ACCTGCCCGA GTTCATCGTT
GCCGAGGATG GCAGGCCGAT CGGCACCATC GAGGACGGCG ATGCGGTCGT GTTCTACAAC
TTCCGTGGCG ACCGCGCGAT CGAGATCACG CGCGCCTTCG TCGAAGAGCA CTTCACCGCA
TTCGACCGCG TGCGCCATCC GCGCACGACC TACGCCGGCA TGCTGCAGTA CGACGGCGAC
CTGCAACTGC CCAAGCGTTT CCTGGTTGCC CCGCCGGCGA TCAAGGACAC CTCCAGCGAG
TGGTTCAGCA AGTCCGGCCT CGCCCAGTTC GCCTGCTCCG AGACGCAGAA GTTCGGCCAC
GTCACCTACT TCTGGAACGG CAACCGCTCG AACAAGTTCG ACGGCGAAAC CTGGCAGGAA
GTCCCCAGCG ACGTCGTGCC CTTCGAGCAG CGCCCGTGGA TGAAGGCAGC CGAGATCACC
GACGCGATGA TCGCCGCGCT GCAGTCCGGC CGGTTCAAGG TGCTGCGCTG CAACTACGCC
AACGGGGACA TGGTCGGCCA CACCGGCAAC TTCCGCGCCG CGACCATGGC GATCGAGGCG
GTGGACCTGG CGCTCGCGCG CCTGCTGCCG GCGATCGACG CCGCCGGCGG GGTGGCGCTG
ATCACCGCCG ACCACGGCAA TGCCGACGAG ATGTTCGAGC TCGACAAGAA GACCAGGCAG
CCGGCGCAGA ACAAGGACGG CAGCTACAAG GCCAAGACCG CGCACACGCT CAACCCGGTG
CCGCTGATCC TCTACGACAA CGTCAGCGGC GGCAAACTCG GCCTGAAGCC GCTCGAGACC
GCCGGCCTGT CGAACATCGC CGCCACGGTG GCCAACCTGC TCGGCCTGCA CAAGCACGAC
AAGTGGGACG ACAGCCTGCT GGAGGTGAAG TGA
|
|---|
| Protein sequence | MLQKFPAFAG VQGPVVVIVM DGYGIPRHEV GSAIDAARKP TLDRLFAQYP NIVLRAHGTA
VGMPSDDDMG NSEVGHNAIG AGQVYAQGAA LVANAIAEGA IWQGEAWQQI VAGAKTGANG
KAGVLHFIGL FSDGNVHSHI DHLKAMVLRA KEEGVPTVRI HALLDGRDVP ETSALDYVVP
FEAFLKDIST AGFDARIASG GGRQTITMDR YDANWPMVAR GWRTHVLGEG PQFASATDAV
HGLREKHPGT IDQDLPEFIV AEDGRPIGTI EDGDAVVFYN FRGDRAIEIT RAFVEEHFTA
FDRVRHPRTT YAGMLQYDGD LQLPKRFLVA PPAIKDTSSE WFSKSGLAQF ACSETQKFGH
VTYFWNGNRS NKFDGETWQE VPSDVVPFEQ RPWMKAAEIT DAMIAALQSG RFKVLRCNYA
NGDMVGHTGN FRAATMAIEA VDLALARLLP AIDAAGGVAL ITADHGNADE MFELDKKTRQ
PAQNKDGSYK AKTAHTLNPV PLILYDNVSG GKLGLKPLET AGLSNIAATV ANLLGLHKHD
KWDDSLLEVK
|
|---|
| |