| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0056 |
|---|
| Symbol | |
|---|
| ID | 7083439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 61359 |
|---|
| End bp | 62705 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643697103 |
|---|
| Product | protein of unknown function DUF88 |
|---|
| Protein accession | YP_002353752 |
|---|
| Protein GI | 217968518 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAGCG CCCTCTTCGT CGACTTCGAT AACGTCTATT CCGGCCTGCG CAAGCTCGAC
CCGGCCATCG CCGACCGCTT CGCCCGCCAG CCCCTGGAGT GGGTGAACTG GGTGATCGGC
GAGCTCGAGC TGCCCGACCA CGCCCCCGCC GGCGCGCGCC GCCGGCTGCT GGTGCGACGC
TGCTATCTCA ACCCGCAGGC CTATCAGCGC TTCCGGCCGT CCTTCAACCT CGCCGGCTTC
GAGATCATCG ACTGCCCCGC GCTGACGAGC GAGGGCAAGA CCAGCACCGA CATCCACATG
GTGCTCGACA TCATCGACCT GCTGCAGCAC GAGGCCCGTT ACGACGAGTT CATCGTGTTC
TCGGCCGACG CCGACTTCAC CCCGGTGCTG CGCAAGCTGC GGCGCTGGGA TCGGCGCACC
ACGGTGCTGG CGATCGGCTT TCCGTCCGCG GCCTATCGCG CCTCGGCCGA CCTGCTGATC
GACCCCGACG AGTTCGTCCG CAACGCCCTC GGCTTCAAGG ACGAGGACGA TGCGCCCGGC
GCCGGCGCGC CCCCTGCCGA CGTCGCCCCG GAAAGCCTGT CGCTCGCAGC GAGCGCACGT
TTCGCGCAGG CGTCGCCGGA AGCGGCCCGG AGCGTTCCCC CGGCCTCGTT CTCCAGCGGC
GCCGACGCCC TCGACCACGA CCTCGCCGAG ATCGTCGAGA CCATGCGCGC CGAGGTTGCG
CGCTCGGCCG CGCCCGTCCC CTGCAGCCGC CTGGCGAGCC TGATCACCAC GCGCCACCCC
GCCCTCGCCG CCGACTGGAA CGGCAAGGGC AGCTTCCGCA GGTTCGTCGA CAGCCTCGAG
CTCGCGCCGC TGCGTTTCGA CTGGAGCAAC AGCGGCGGCT TCGTCTTCGA TCCCGCCCGC
TCCGGCGCCG GCATGCAGGA CGGCAGCGTC ACGCCCGACT GGGGCGAGGA TCAGGACATC
CTGCCGCTCG CCATGCAGAT CCACGAGGTC TCCGGCGTCC CCCTGCTCGG CCCGGCCGAA
TACCGCGCGC TGTTCTCGAT CATCGCGGAC GACGTCGGCC GCCATCCCTT CGACCTCAAG
GAAACCGGCA AGCGCGTGCG CGACCGCCTG CGCGAAGCCG GTCTCGGCGG CAGCCGGCTC
GACGTCAACT GGATCCTGCG CGGACTGCTG ATGCGCGGCC ACGCCTTCGG CGAGGGGCAG
GACCGCGCCG CGACGCTCGC CACCAAGACG GCGAACAACG TGCGCTCGCT CTGCCTGCGC
GAGCAGATGA TCCTCGACCG CGCGGCCGAG ACGGCGATCG CGCGCTGGTT CGGCACCCAT
CCGGCTCCCA CCCGCAGCGG GCAGTGA
|
|---|
| Protein sequence | MKSALFVDFD NVYSGLRKLD PAIADRFARQ PLEWVNWVIG ELELPDHAPA GARRRLLVRR
CYLNPQAYQR FRPSFNLAGF EIIDCPALTS EGKTSTDIHM VLDIIDLLQH EARYDEFIVF
SADADFTPVL RKLRRWDRRT TVLAIGFPSA AYRASADLLI DPDEFVRNAL GFKDEDDAPG
AGAPPADVAP ESLSLAASAR FAQASPEAAR SVPPASFSSG ADALDHDLAE IVETMRAEVA
RSAAPVPCSR LASLITTRHP ALAADWNGKG SFRRFVDSLE LAPLRFDWSN SGGFVFDPAR
SGAGMQDGSV TPDWGEDQDI LPLAMQIHEV SGVPLLGPAE YRALFSIIAD DVGRHPFDLK
ETGKRVRDRL REAGLGGSRL DVNWILRGLL MRGHAFGEGQ DRAATLATKT ANNVRSLCLR
EQMILDRAAE TAIARWFGTH PAPTRSGQ
|
|---|
| |