| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0019 |
|---|
| Symbol | |
|---|
| ID | 7085117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 27045 |
|---|
| End bp | 28148 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643697069 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_002353718 |
|---|
| Protein GI | 217968484 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGCGCA CCGTCGTTGA CGCACTCGAG CGCGAGCGCG AAGCGCAGCG TGAACGGGCC
GATACGGAAC AGGACGACCC GCCGGCGCCC GCCTCTGCGG AGGCGCCCCC CGTCGTGCCC
TCGCCGACTG CGGATGCGGA CCTTGGCCAT GACTGGCACC TGGTCTTCGA TCCCGAGGCC
ATCCGGCATG TCGCCGACGA GACGCAGCAC GGCGACCGTG AGCGCAGGCC GCAGTTCAAA
CGCTGGGTCG AGAAGATGGC CCGTAACGGG GGCAAACGTC TCGTTCAAGA CCTCCCCGAG
CAGCTGGACG AACTGGTCGA GCAGTTTCCG AACTTCAGGG AGACGGTACA CGTCATTGAG
GCGCTCGCCG CTGTGCATCG ACACCTGCCG ACTCAACGGC AATCGGAAGC CCTGCTGCTT
GCCGGTCCGC CCGGTGTCGG CAAGACGTAT TTCATCGAAG CATTCGCAGC CATGGCGCAC
GTCGACTTCG GTCCGGTGTC ACTTGGCAGC GCGCAAGGCG CGTTCGAGCT CACGGGCACT
TCGCAGCACT GGTCCAACTT CGCTCCCGGC AAGGTATGGC AACTCCTGGC TGAGGGCGAC
CACGCAAACG CAGTTCTCCT GCTCGACGAG ATCGACAAGG CGGGCGGCGA CGACCGGTAC
CGTACGAGCA GCGCGCTGCT CGACCTGCTG GAGTCGCGTA CGGCGAGGCG ATTCGTCGAC
CAAGCGCTAG ATATCGAGAT AGATGCGTCA ATGCTGTGGA AAATCGCCAC GGCGAACACA
ATCGACGCGA TCGCGCCGCC GGTGCTCTCG CGTCTGCACG TCATCGCGAT CGAGCCACCG
AGCGACAACC AATTGCGACT GATCTATCTC GCGCAGTGGC GCGAGTTGGT AGCCGACCTC
AGTCGACCGC CCGAGCTCAG TCGCAGCGTG GTTCGCCAGC TCATTGCAAG CCGGGAGCCG
CCGCGCGTCA CCCAGCGCCT GCTGCGCATC GGACTCGGTC GTGCCCTTCA TGACCGGCGA
CGCCGAGTCA GTGATCTGCC CTCTAACCGA CAAGAACCTC GATCGCAGCC CATCGGCTTC
GTGCGCCCGA TGAGCTCGCC TTGA
|
|---|
| Protein sequence | MPRTVVDALE REREAQRERA DTEQDDPPAP ASAEAPPVVP SPTADADLGH DWHLVFDPEA
IRHVADETQH GDRERRPQFK RWVEKMARNG GKRLVQDLPE QLDELVEQFP NFRETVHVIE
ALAAVHRHLP TQRQSEALLL AGPPGVGKTY FIEAFAAMAH VDFGPVSLGS AQGAFELTGT
SQHWSNFAPG KVWQLLAEGD HANAVLLLDE IDKAGGDDRY RTSSALLDLL ESRTARRFVD
QALDIEIDAS MLWKIATANT IDAIAPPVLS RLHVIAIEPP SDNQLRLIYL AQWRELVADL
SRPPELSRSV VRQLIASREP PRVTQRLLRI GLGRALHDRR RRVSDLPSNR QEPRSQPIGF
VRPMSSP
|
|---|
| |