Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0007 |
Symbol | |
ID | 7085105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 11908 |
End bp | 14043 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643697057 |
Product | hypothetical protein |
Protein accession | YP_002353706 |
Protein GI | 217968472 |
COG category | [V] Defense mechanisms |
COG ID | [COG2810] Predicted type IV restriction endonuclease |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTACTA CACCAACCCA AACTCTCCTT CAGGCATATG CGAGCCTCGT TTTACATGAC GCGAACGAGG CAGCAACGCG TCTAAGAGTC ATTGACAGAG TGTTGCGTGA GATTCTCGGT TGGCTCGACG AAGACATCTC ACCCGAAGAG CATGTTACGG AGGATGGTTT AACCACTTAC GCTGACTATA TTCTGCGGAC TGCGAATACA GCAATCGTGG TCGAAGCAAA GAAGGCAGGT GCCGCGTTTG CGGCACACGC AGGAAATCGA CGCGTAAAGC TCTCTAACGC ATTTCTTCAA AGCGAACTCG GAACAGCAAT AGTTCAAGCA CGAGATTACG CTCGCAAGTT GTCGATTGAT TTCGCAGTCG CGACTAACGG CTCAACTTGG GCGATCTTCC CAGCGCAACG GCACGACCAA GTCAAATTTC ATGAATCCAC AGCGCTCGTT TTCTGGTCAC TCGATGACGC ACTGAACGAA AGTTATCAAG AGTTCTTCGA TCTCTTGAGC CGAGACTCAG TCATTTCTGG CAGCCTGGAA ACAAACCTTC TTGGACGAAC CGAGAATCAG GTAGAGAACA GAAAACTTGG TAGCTTTTTC TCAACAAACG CTCGCCAAAC TCTGAGCAAC CCTGTTTTCC CTCTTATCGA AAACGAGGTA ATGACATCGT TCTCAGACTC AATCGTTGAT CTGAACGATG AGTCGTTCGA GCGCTGCTAT GTGGCTACTC CAGAGTCTAT CAAATTCGAC CATAAGATTC GCATGCATGT CGGTCGGCGT CAGCAGCTCG TGAGCGGCAC CGTGCTTCGG CCCATGAAAT CTAGCGACGC TGAACAATTA TTCGCAAAGA TCCAGCAATC GTCTAGCGCA AGTAGAAAGC CACTCGCGAT TCTCTTGCTT GGCACCGTTG GGGCAGGAAA AACGACGTTT CTTCACTACA TGCGGAAGGT GCGTCTTAAG GAAGTGTTCA CGCAAGATGC GGCACGCCCC TATCCTCACT GGTTGCATCT AGACTTTCTT ACCAATTCAC CTAACATAAC AGCCACCGAC TTCATATATA GCTCGCTACG AGAATATATC AATCAAGACC CATTCTTGCA GGACTGGGAT AAGTGCATAA AAAACGCATA CGCGGATGAG ATAAAGGCGC TGCGCTCAGG GCCATTGGCG GCAATGTCCG GATCGCAGGA GAAAGTTAAC GAGCGTATAG CGGATAAGAT ATTTTCGGAC TATCAGTCTA TACGACCTTA TGTTGACCGT ATTCTCAGAT ACGCGACGAA ACATTCCGCA TTCTTCCTTG CGATAGACAA CGTGGATCAG ATCGAAGACG AGGATATTCA ATCAAAGTTA TTCACTGAAG CGCTCGCAAT CTCACGTAGC TTGTCGTTAA ACTTAGTCTT AGCCTTGAGG CAGGGGACCT TTGCGCGGCA CAGAAACTCA CCGTCAATTG ACGCATTTGA CTTTGAAGCC GTTCAAATAG ATCCGCCACG GATCGCGTCG GTCCTCTCGA AGCGATTTGC GTTAGTCAAA CACCTTGCGG CGGGCAAGAG AGGAGATTTT ATTGCTGAAA ATGGGGCAAG AGTGCGCGTC GAAGATATCT CTCAAATTGT CGACTTATTG CAAGGTTCCG TGCTGGGAAC CGAAATCGGA ACACGCATCG AGGTCCTTGC GACTGATGAT GTTCGACTTG CGCTAAGGAT GACTCGAGAG TTTTTGGAGC GAGGCTACAC AAATCCAGGC AAGGCTATCG AGTACCACCG TAGAACCGGT AAATATGTTC TCCCGCGCCA CGAAGCATTT CGTGCAATCA TCCTTGGCAC AAGAACAGTC TATACAGAAG ACTTCTCTCC AATCGGGAAC CCATTTGACT CTAGAATTGG AGTCAATCAG GCTCAAATGC TGCGCCTGTA TGTCTTGTCT GCAATTGTGG CATACGCGAG CGAGAACGGT TTTAGATTTA TTGATGTTGC CGGCTGCCTG ATTCCGTACA AATCTGGCGT CGTTAAACGG CGGTGTCGAG CGGGCGACGC CGGGGCCGTA AACGGGACGA GGGCCGCGCG CGTCGGCCCT CGTTGTCTCG GGTGGGGTTG GTCGATCAGA ACGACGGATC GTCGAACGGC AGTTCGGCCT GCGTGA
|
Protein sequence | MITTPTQTLL QAYASLVLHD ANEAATRLRV IDRVLREILG WLDEDISPEE HVTEDGLTTY ADYILRTANT AIVVEAKKAG AAFAAHAGNR RVKLSNAFLQ SELGTAIVQA RDYARKLSID FAVATNGSTW AIFPAQRHDQ VKFHESTALV FWSLDDALNE SYQEFFDLLS RDSVISGSLE TNLLGRTENQ VENRKLGSFF STNARQTLSN PVFPLIENEV MTSFSDSIVD LNDESFERCY VATPESIKFD HKIRMHVGRR QQLVSGTVLR PMKSSDAEQL FAKIQQSSSA SRKPLAILLL GTVGAGKTTF LHYMRKVRLK EVFTQDAARP YPHWLHLDFL TNSPNITATD FIYSSLREYI NQDPFLQDWD KCIKNAYADE IKALRSGPLA AMSGSQEKVN ERIADKIFSD YQSIRPYVDR ILRYATKHSA FFLAIDNVDQ IEDEDIQSKL FTEALAISRS LSLNLVLALR QGTFARHRNS PSIDAFDFEA VQIDPPRIAS VLSKRFALVK HLAAGKRGDF IAENGARVRV EDISQIVDLL QGSVLGTEIG TRIEVLATDD VRLALRMTRE FLERGYTNPG KAIEYHRRTG KYVLPRHEAF RAIILGTRTV YTEDFSPIGN PFDSRIGVNQ AQMLRLYVLS AIVAYASENG FRFIDVAGCL IPYKSGVVKR RCRAGDAGAV NGTRAARVGP RCLGWGWSIR TTDRRTAVRP A
|
| |