Gene Dtur_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1808 
Symbol 
ID7082988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1848277 
End bp1849521 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content39% 
IMG OID643458918 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002353693 
Protein GI217968187 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGCA AAATTATAAT GATTTTGTTA ATTTCTATTC TCTTACTTTC AGTTTCCTCT 
ATGGCTCAAC TTAAAGGTAA ATTAGAGATC TTTAGTTGGT GGACTGCAGG GGGAGAAGCA
GAGGGCTTAC AAGCTTTAAT TGATATATTC CACAAAAAAT ATCCAAATGT AGAAATAATT
AATGCTACCG TCGCAGGAGG GGCTGGTGCT AATGCTAAAG CAGTGTTAAA GACTAGAATG
CTTGGTGGAG ATCCGCCTGA TACTTTCCAA GTACATGCAG GACACGAGTT GATTGATACA
TGGGTAAAAA CAGGTTTCAT GGAACCTATA ACCTTCTTGT ATAAACAAGA GGGTTGGGCA
AAGGTAATGC CAAAGGGAAT TCTTGATATT GTATCTTACA AAGGTGATTA TTGGTCTGTT
CCTGTAAATA TTCATAGGGC AAACGTGCTT TGGTATAATA AGAAAATATT TGAAGAAAAC
AATTTAACTC CTCCTAAAAC TTTTGAGGAT TTCTTTAAAG TAGCAGATGC ACTAAAGTCA
AAAGGTATAA CTCCCTTTGC CCTTGGAACT AAGGATGGTT GGGAAGCAGC TCATGTATTT
GAGACAGTGC TTATTGGAAA ACTTGGGGCT GAAGGTTATA AAGGACTTTG GGATGGTAAG
ACTAAGTGGT CAGATCCAAG AGTTACTGAT GCTCTTGAGA CTTTCAAGAA AATGCTAACT
TATGTGAATT CAGATCATTC AGCAAGGACA TGGGATGAGG CTTGTGCTTT AATTGTAGAT
GGTAGTGCTG CTATGACTAT CATGGGGGAT TGGGCAGTAG GATACTTCTA CGCTAAGGGT
TTTAATGATT TTGGCTGGGT CCTTGCACCT GGTAATGCTG GTATTTTTGA CGCTCTTTCT
GATAGTTTTG GACTTCCTAA GGGGGCGAAA AATAGAGATA ATGTGATAGC CTTCTTAAAG
GTGTTAGGTT CTAAGGAGGG GCAAGAAGCA TTCAATCTTA AGAAGGGATC AATTCCTGCA
AGAACTGATG TAGACAAATC AAAGTTTCCA CCTTATCAAA GATCTTGTAT GGAGGACTGG
TTGAAACATA AGATTGTACC AAGTGTAATG CATGGAGCTG CAGCTTCTGA AGGCTGGGTA
ACCGAATTTA AAGATGTAAT CTCTCTGTTT GTGGTGAGAC CAGATGTGAA GACAACCCAG
AAAGCACTTG TGAATGTTGC TATTAAAAAT GGTGTAAAAC AGTAA
 
Protein sequence
MFRKIIMILL ISILLLSVSS MAQLKGKLEI FSWWTAGGEA EGLQALIDIF HKKYPNVEII 
NATVAGGAGA NAKAVLKTRM LGGDPPDTFQ VHAGHELIDT WVKTGFMEPI TFLYKQEGWA
KVMPKGILDI VSYKGDYWSV PVNIHRANVL WYNKKIFEEN NLTPPKTFED FFKVADALKS
KGITPFALGT KDGWEAAHVF ETVLIGKLGA EGYKGLWDGK TKWSDPRVTD ALETFKKMLT
YVNSDHSART WDEACALIVD GSAAMTIMGD WAVGYFYAKG FNDFGWVLAP GNAGIFDALS
DSFGLPKGAK NRDNVIAFLK VLGSKEGQEA FNLKKGSIPA RTDVDKSKFP PYQRSCMEDW
LKHKIVPSVM HGAAASEGWV TEFKDVISLF VVRPDVKTTQ KALVNVAIKN GVKQ