| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1767 |
|---|
| Symbol | |
|---|
| ID | 7082946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 1802889 |
|---|
| End bp | 1803548 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643458877 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
|---|
| Protein accession | YP_002353653 |
|---|
| Protein GI | 217968147 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.113369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATATAC CTGATGGTTA TTTAGGGCCA GAAACTTATG GAAGTCTATT TGTTTTAATG
GTTCCTTTTT GGGCTAAAGC TTATAATGCT GTAAAAAAAT CTTTAAAAGA AAAAGATGTT
CCCCTTCTTG CTATCTCTGC AGCTTTTTCT TTTGTGATTA TGATGTTCAA TATACCTATT
CCCGGAGGAA CCACAGGGCA TGCAGTAGGG AGTGTCCTTA TTGCTATACT TCTTGGACCT
TGGACTGCAA CTCTTGTTAC CTCTATTGTT CTTATAATAC AGGCACTGAT TTTTGGGGAT
GGAGGAATTA CTGCTATTGG AGCAAATTGT TTTAATATGG CAATTGTTAT GCCTTTTTTA
GGATATTATG TTTATAAGCT TGTGAAAGGG AAGGCAAATT TAGGTTCTAA AAGAGAAATT
ATTTCTGCAG GAATTGGAGC ATATGTAGGG ATAAATGTGG CTGCTTTGCT TACTGCTATA
GAGCTTGGTA TTCAACCTTA TATAGCAAAG GATGCTAATG GGCTTCCTCT TTATTGTCCT
TATCCTTTGA AAGTTGCTAT TCCTGCGATG ATGGTAGAGC ATCTTTTAAT TTTTGGTATT
GTGGAAGCTG TAGTTACAAT GGCTGCGCTT TATTATTTAA GAAAAATAGA AAATAAATAG
|
|---|
| Protein sequence | MHIPDGYLGP ETYGSLFVLM VPFWAKAYNA VKKSLKEKDV PLLAISAAFS FVIMMFNIPI
PGGTTGHAVG SVLIAILLGP WTATLVTSIV LIIQALIFGD GGITAIGANC FNMAIVMPFL
GYYVYKLVKG KANLGSKREI ISAGIGAYVG INVAALLTAI ELGIQPYIAK DANGLPLYCP
YPLKVAIPAM MVEHLLIFGI VEAVVTMAAL YYLRKIENK
|
|---|
| |