| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1752 |
|---|
| Symbol | |
|---|
| ID | 7082272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 1781423 |
|---|
| End bp | 1783579 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643458862 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_002353638 |
|---|
| Protein GI | 217968132 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1609] Transcriptional regulators
[COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.972307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGAAAGA GGATTGGAGT CATAGTAAAC TACTTATATG AGGAATACCA ATTAAAGGTA
ATCTCTGGAA TAATTAATAC TTCCAGAAAG TATAATATTG ATCTTTTCAT CTTTGTGGGA
GGAAATCTAA ATTATGATAT AGAAAACCTA CAGAGAAATA AAATATATCA GTTGATAAAC
TATAAAGATA TTGATGGATT AATAATTCTT GGTTTAGTCC TTGGATACAA CATACCAAAA
GAAAAGATTA TTGGATTCTA TAAAAATTTT AGTGATATAC CTACAGTAAG CATTGGGCTT
ACCGTAGAAA ACTTTCCTTC TATTACCATT GATAACTCAA AGGGCTTTAT TAACCTACTT
GATCACCTTG TAAAAGACCA TAAATACAAA AATTTTACCT TCGTAACAGG ACCTCTAAAC
AATGATGAGG CAAAAGAGAG ATATGAGATC TTTTTGAAAA TAATGAGAGA GAACAATATA
GAGATAAAAG ATGACCATAT TTACGAAGGG GATTTCTCAA AGTTTTCTGG GATTAATGCA
GTAAGAACTT TTTTGGACGA GAGAAAGTTA AAGCCAGATG TAATTGTCTT TTCCAACGAC
ATGATGGCTA TAGGTGGAAT AGAAGAACTT AAAAGAAGAA AGATAAAAAT TCCAGAAGAT
ATTGCAATAA CCGGCTTTGA TAATATTGAG GAATCCTATT TTATAACCCC TTCTCTTACT
ACCGTAAACC AGCCCCTTTA CGAGCTTGGA GAAAAAGCAT TAGAGATCTG CTTATCTATA
ATCTTAGGAG AAAAAGTAAA AGAGAATATT GTCCTCCCCA CAAGATTAAT AATAAGAGAA
TCTTGTGGAC ATAAAGAAGA AATTTTTAAT AAAGCAATTC CACCATCGGA AAAGAAAATA
GTAAATATTA CTGAGGCTAA AATTCTAAAA AATAAATTTT TAGAATTTCT AACAGAAGAT
TCTCAAATTA AAAAGGAAAA CTATGAGTTG TTCTCTAAAA TTTATGATCT ATTTTTTACC
TCCCTATTTG AGAAACGACA AATCTTTTTA GAAAAAATTC ATGAGTACTT GGAAAAAAAT
CTCTCCACCA CAGAAGAGTT AAAAGAAATA GTGTTTTTAA TTGACTCCTT TACTAAAACA
TATTTAGAAA AAGATTTAAA GAAAGATGCA GAAACTCTAA TCCTGAAAGC AGAAAGAATA
ATAAGTACTT ATTCAGAAAA GTTATTAAGA TATGAGCAAT ACAAAACTAA CGAAGAAATA
GAACTTTTAG GATATATTGG TTCTGATCTA CTTTCAAGTT TTAGAATGGA GGATATTATA
GAAAGGATAT CTGCAAGACT TCCAGAGTTA AATATCAACA GTTTTTACCT TGTATTCACC
GATGAAAACC TAAAAGAGAA AAAACTTATA TTTGCCCACT TAAGAGATGA AAATGTTCGA
GAAGAAATAA AACTTAGCTT TGATGAAATA ATACCTAAAA AACTTTATCC TAAGGAAAGA
AAAGAACTTA TAGTAAAACC TCTTTATTTT CAAGAAAACT TTTTTGGATA TATGGTATTG
GAGTATGGTC CCAAGAGAGG TGTAATATAT GAAATTTTAA GATCTCAGAT TAGTGCAGCC
ATTCAAGGAG CAAAAATCTT CGAAGAACTA AACCGATTAG CCATTACTGA CCCACTAACC
CAACTTTTTA ATAGGAGATA TATTGAAGAG GAACTTAGAA AAGAGATAGA AAGATCCAAA
AGATATTCAA GACCATTGTC GGTTATGGTG CTCGATCTTG ATAATTTCAA AATTATAAAT
GACATCTTGG GTCATCAATA CGGAGATGAA GTACTAAAGA AGATTGGAGA AAATTTGAAG
AAATCTTGTA GAAAAGTAGA CACCGTAGGA AGATTTGGAG GAGACGAATT TGTAATAATC
CTGCCAGAAA CGAATCTTGA AAAGAGTATA AAAGTTGCAA ATAAAATAAT AAAAAACCTT
GAAAAAATGG AGATAAAATT TCCCAACGGT GAAAAAATAT ACATAAGTAT AAGTATTGGT
ATAGCATCAT ATCCGGAAAC CAGTAAAGAT CCAGAAAAAA TTTTAAGTCT TGCTGATTCA
GCAATGTATA ATGCAAAAAG ATTAGGAGGA AAGCAATATT CTATTGCAAG TTTTTAA
|
|---|
| Protein sequence | MRKRIGVIVN YLYEEYQLKV ISGIINTSRK YNIDLFIFVG GNLNYDIENL QRNKIYQLIN
YKDIDGLIIL GLVLGYNIPK EKIIGFYKNF SDIPTVSIGL TVENFPSITI DNSKGFINLL
DHLVKDHKYK NFTFVTGPLN NDEAKERYEI FLKIMRENNI EIKDDHIYEG DFSKFSGINA
VRTFLDERKL KPDVIVFSND MMAIGGIEEL KRRKIKIPED IAITGFDNIE ESYFITPSLT
TVNQPLYELG EKALEICLSI ILGEKVKENI VLPTRLIIRE SCGHKEEIFN KAIPPSEKKI
VNITEAKILK NKFLEFLTED SQIKKENYEL FSKIYDLFFT SLFEKRQIFL EKIHEYLEKN
LSTTEELKEI VFLIDSFTKT YLEKDLKKDA ETLILKAERI ISTYSEKLLR YEQYKTNEEI
ELLGYIGSDL LSSFRMEDII ERISARLPEL NINSFYLVFT DENLKEKKLI FAHLRDENVR
EEIKLSFDEI IPKKLYPKER KELIVKPLYF QENFFGYMVL EYGPKRGVIY EILRSQISAA
IQGAKIFEEL NRLAITDPLT QLFNRRYIEE ELRKEIERSK RYSRPLSVMV LDLDNFKIIN
DILGHQYGDE VLKKIGENLK KSCRKVDTVG RFGGDEFVII LPETNLEKSI KVANKIIKNL
EKMEIKFPNG EKIYISISIG IASYPETSKD PEKILSLADS AMYNAKRLGG KQYSIASF
|
|---|
| |