Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtur_1670 |
Symbol | |
ID | 7082189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dictyoglomus turgidum DSM 6724 |
Kingdom | Bacteria |
Replicon accession | NC_011661 |
Strand | + |
Start bp | 1684495 |
End bp | 1686675 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643458779 |
Product | glycoside hydrolase clan GH-D |
Protein accession | YP_002353556 |
Protein GI | 217968050 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTATAA TATATGATAG AGAAAATAAT ATTTTTCACT TAATGGCAGG AGATTCCAGT TATATTATAA AAATCTTTAA AAACAAATAT CCTGTACATC TTTACTGGGG GAAAAGACTA AACCATTCTC ATTTCTCAGA AGCTTTTATC ACCTCTCCCT TTGGGGCAAA TCCAGATCCT AATGACAAAT CCTTCACTTT TGACAGAATG CTATTAGAGT ATCCTTCGTA TGGAAATTCT GATTTCAGAC ATCCAGCCTT TCAAGTAGAG CAAGAAGACG GTTCCCGAAT AACCCATTTA GTTTTTAACA ACTACAGAAT ATATAAAGGA AAGCCTAAGC TTGAAGGTTT ACCCGCAACA TACGTAGAAG ACGAAGATGA GGCAGAAACC CTTGAATTAG AACTTGCAGA TGAACTTATA AACTTAAGAG TCATTCTATT ATACACCGTT TATAAAGATT ATAACGTAAT TACAAGAAGC ATTAAATTTA TAAATGAGGG AAATCAAAAA CTAAAGATAT TAAGAGCTCT AAGTACTTGT GTTGACTTTG ATCATTGTAA TTTTGATCTT CTTCATCTTT GGGGATCATG GGCAAGGGAA AGATACGTAG AGAGAGTACC ATTGATGCAT GGCATAAAAG TAATTGAAAG CTCCCGTGGA GAAAGCTCTC ACCAACACAA CCCCTTTATA GCTTTACTCT CCAAAGATGC TACTGAGAAA CATGGCGATG TATATGGATT TAGCTTAGTA TATAGTGGAA ACTTTGCAGC AAACGTAGAG GTGGATCAAT TTAATACCAC AAGAGTCACT ATGGGTATTA ATCCCTTTGA ATTTACATGG ATTCTTGAAA AGGGTGAAAG TTTTCAAACA CCAGAAGTAG TAATGGTTTA TTCCTCTCAA GGAATAGGAG AAATGTCTAG AACTTATCAC AGATTATATA GAAAAAGACT TGTGAGAGGA GTTTATAGAG ATAAAAGAAG ACCTATTCTT GTAAACACAT GGGAGGCAGT TTATTTTAAT ATAAATGAAG AAAAACTTCT CTCCTTAGCT AAAGAGGCTA AAGAACTTGG AATTGAACTT TTTGTCCTTG ATGATGGATG GTTTGGAAGA AGAGACGATG ATACAAGTTC TCTTGGAGAT TGGTATGTGG ACAAAAGAAA ATTACCTAAC GGACTTGACG GATTGGGCAA AAAATTAAAT GAGATAGGAC TTAAATTTGG ACTTTGGTTT GAGCCTGAAA TGGTTTCTCC TGATAGCGAA CTATATAGAA AACATCCTGA TTGGTGTATA CAAGTTAGGG GAAGAACTCT CTCTCAATGT AGAAATCAGT ATGTGCTTGA CATCACGAGA AAAGAAGTAA GAGAAGAAAT ATTAAGAATG ATGAAAGAGA TTATAAAAAA TGCACCTATA GAATATATCA AATGGGACAT GAATAGACCT TTAACTGAAG TAGGTTCTCT TGCTCTCCCT CCAGAAAGAC AAAAAGAAGT ATTTCATAGA TATGTGTTAG CTTTATATGA AATGATGGAG GAACTTATTT CAGAATTTCC CTATATCCTC TTTGAGGGAT GCTCAGGAGG AGGAGGCAGA TTTGACCCCG GAATTCTCTA TTATATGCCT CAAATTTGGA CCAGTGATGA CACCGATGCT ATAGAAAGAT TAAAGATACA ATGGGGAACC AGTATAGTAT ATCCAGCATC CACCATTGGA GCCCATGTAT CTGCAGTTCC CAATCATCAG GTAGGAAGAA TAACTCCCTT AAAAACCAGA GGCTATGTAG CCATGTCTGG TGTATTTGGA TACGAAATGG ATCTTACAAA ATTAACTCCT GAGGAAAAGG AATTAGTAAA AGAACAAATA GAGATATATA AAAGAATATG GCATATTGTC TTTGAGGGTG ACCTCTACAG ACTTGTAAGC CCCTTTGAGG AAAACTCTGC TTCTTGGATG TTTGTTACTC CTGATAAAAA AGAGGCTTTT GTGATTTATG TAAATATGTT AGCTGAACCT AATCCTCCTT TTAAAAAGCT TAAACTTGAT GGATTAGATC CCAACAAAAA GTATATAATC GAGGGTACCG ACAAGGAATA CTATGGAGAT GAACTTATGA ACATTGGTAT AAATATACCT CCTATGAGAG ATTTTGATTC TTTCGCTTTT ATATTAAAAG AAAAATCTTA A
|
Protein sequence | MPIIYDRENN IFHLMAGDSS YIIKIFKNKY PVHLYWGKRL NHSHFSEAFI TSPFGANPDP NDKSFTFDRM LLEYPSYGNS DFRHPAFQVE QEDGSRITHL VFNNYRIYKG KPKLEGLPAT YVEDEDEAET LELELADELI NLRVILLYTV YKDYNVITRS IKFINEGNQK LKILRALSTC VDFDHCNFDL LHLWGSWARE RYVERVPLMH GIKVIESSRG ESSHQHNPFI ALLSKDATEK HGDVYGFSLV YSGNFAANVE VDQFNTTRVT MGINPFEFTW ILEKGESFQT PEVVMVYSSQ GIGEMSRTYH RLYRKRLVRG VYRDKRRPIL VNTWEAVYFN INEEKLLSLA KEAKELGIEL FVLDDGWFGR RDDDTSSLGD WYVDKRKLPN GLDGLGKKLN EIGLKFGLWF EPEMVSPDSE LYRKHPDWCI QVRGRTLSQC RNQYVLDITR KEVREEILRM MKEIIKNAPI EYIKWDMNRP LTEVGSLALP PERQKEVFHR YVLALYEMME ELISEFPYIL FEGCSGGGGR FDPGILYYMP QIWTSDDTDA IERLKIQWGT SIVYPASTIG AHVSAVPNHQ VGRITPLKTR GYVAMSGVFG YEMDLTKLTP EEKELVKEQI EIYKRIWHIV FEGDLYRLVS PFEENSASWM FVTPDKKEAF VIYVNMLAEP NPPFKKLKLD GLDPNKKYII EGTDKEYYGD ELMNIGINIP PMRDFDSFAF ILKEKS
|
| |