| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1594 |
|---|
| Symbol | |
|---|
| ID | 7082029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 1608798 |
|---|
| End bp | 1611683 |
|---|
| Gene Length | 2886 bp |
|---|
| Protein Length | 961 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643458702 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002353481 |
|---|
| Protein GI | 217967975 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGAGGT TTAAAGAAGC TATGAAACCG TTTTTAAGAT TTGTGCTTAT ATTGCTCTTT
TTATTGGGAT TAATTACAAA GATAATTTTT GCTCAAGGCT CCTCAGCTAA AAATCTAAAT
GTTATCTTTG AACTTATAAG TAAAGAAAGT TCGTATGAAA CTTATTTATC AAAATTTTCT
AATAAAAATA GACCTGAAGT AGTCTTGGTC ATACCTGCAG TAAATTATTC TGCTTACTCT
AAAGATATGG AGTTAAAGAA GCTCACAAAT TTAACCCAAG ATAAACATCC TGTTCTTTAT
ATGGGTGAGA ATGGTTTTGT AGAGTGGACT TTTAATATTG AGGAAGAGGG TTTGTATAAC
ATTGCTGTGA AATATTATCC TGTACCTGGA AAAAATTCTG CTATAGAGAG AGAAATACTA
ATTGATGGTA AGAGACCCTT TAACGAAGCA AGAATTGTTA GATTTGAAAG GATATGGAAA
GATGCTGGAG ATCCCTTGAG AGATAATAGG GGTAATGAAT TGCGGCCATT GCAAGTGGAG
TTTCCTATGT GGGTGGAGAA GGTTATTGAT GATTCTGATG GTTTATATTC TGAGCCATTT
CTTTTCTATT TTTCAAAGGG AAGACATACT CTGAGATTTG TTTCAGTAAA AGAACCTGTA
GCAATAGATT ATATCAAAAT TTTTAATCTT AAAGATATTC CCTATTATAG AGAGGTAATG
AAAGAAGAGC ATATCTCTAA AAGCAACTTT AAGAATATTA TTGTAAAAAT TCAAGGAGAA
AAAGCTCACT TAAAATCAGA GCCAACTCTT TATCCTGTGT ACGATATGAG CAATCCTCTT
AATGAGCCTT ATAGTTCTAA AAACAAACTC TTAAATATAA TAGGAGGGTA TAACTGGAGA
TCTGCCGGAC AATGGATTGA GTGGAAGTTT ACAGTACCAG AGAGTGGCTT TTATAAGATT
GGGTTTAAAT TTAGACAAAA TGCAAATCCC GGTATACCAT CAGAGAGAAC TCTTTATATA
GATGGGGTTG TTCCTTTTAG AGAGGTAAGA AATATAAAAT TCAAATATGA TACTAAATGG
CAATTCAAGT ATTTGGGAGA TGGAAAAGAA GATTATCTTT TTTATTTAAA AAAGGGAGAA
CACACCCTTA GGCTAAAAGT GAGTTATGAA AGTATAGCAG AAATTATGAG AAATGTATTA
CAATGCTCCA TAGATTTATC TCAACTTTAT ACCAAAATTG TAATGATTAC CTCTCCAAAT
CCTGACCCAT ACAGAGATTA TCTCTTAGAA CAGAGTATTC CAGACCTTAT TCCTACTTTG
GAAAGGAATG CAAAGATATT AAAAGAAAAT GCTGAAAAAT TAAAAATTCT TGGAGGGGAA
AAAGTTAGTG AAGCAGCAAC CCTTGAAAGA GTGGCTATTC AGCTTGAAGG AATGGCTAAG
GAACCGGAGA CTATTGCTCA AAGATTACAA AGATATAGAG ATAATCTATC GGCACTTTCT
GCGTGGGTAC TTGCTATTAG AGAGCAACCT TTAGATATTG ATTACATAAT TATTGCTTCT
CCAGATATGA AATCTCCAAG AGTAAATCCA AACATCCTTG AGGCATTTTT AGATGGAATA
AAGAAGTTTT TCTATTCCTT TTTGGAAGAT TATAACATGA TTGGAACTGT GTATGACAAA
GAAAAAGCAA TAAATGTATG GGTTCAAATG GGAAGAGATC AAGCAGAGAC CCTAAAAATG
CTTATAGATA CAGATTTTAC TCCTAAGACA GGAATAGGAG TTAACCTAAA CATTATAACC
ACAGAAGCAG CTTTACTTTT CTCGGTTGCT TCTAAGGAGA ATCCTCCTGA TGTGGCTTTA
AATGTCCCAA GAGGGCTTGC TGTAGATTAT GGGATAAGAG GAGCTCTTGT GGACATTTCA
AAATTATCTG GTTTTGAGGA GGTAAAGAAG CAGTTTGCTC CTTACGCTCT TGTTCCTTAT
AGCTTTGGTG GAAAAGTTTA CGGACTTCCT ATGACTCAAG ATTTTCCCAT AATGTTTTAT
AGAGCTGATA TATTGGGACG TTTAAATATT GAAATTCCCA ATACTTGGGA AGAACTTTAT
GAAACCATTG CTAAACTGCA GAGTTATAAC TTACAGTTTG CAGCGGGAAC AGGTGGTACA
AGTTTTGATA TTTTTAACAT GCTTCTTCTT CAGAGAGGTG GAAGATATTA CACTGAAGAT
GGCAAAAGAT GTGTTCTTAA TAATGAAGAG GGTGTGACAG CATTTAAAGA ATGGACCAAT
TTGTATGTAC TTTATGGTAT TCCTCTTTAT TATGATTTCT TCAACCGTTT TAGAACAGGA
GAAATGCCAT TGGGAATTGG TCCATATACT ATGTATAACC AATTTAAAGT TGCTGCTCCT
GAAATAAGTG GTCTTTGGGG AATTGCTCCT GTTCCCGGAA GAAGAAAAAA TGATGGTTCA
ATTGACAGAA GTGTAGCTGG AGGTGGAAAT GCCATATTGA TTTTTGCTCA GACTAAGAAG
CTTAAAGAGG CATGGGAATT TGTTAAGTGG TGGGTCTCTA CTGATGTTCA GGCAAGATTT
GGTAGAGAAC TTGAAGCAGT TCTTGGAGCG GGAGCCAGGT ACAATACTGC CAATATAGAG
GCCATGAGTT ATTTGCCATG GCCTTCTTCA GATTACAAAA TCCTCTCTAC TCAATGGAAA
TATTTAAAAG AAATTCCTAA TGTTCCTGGA AGTTATTATG TTTCAAGACA TTTAGACAAT
GCCTTTAGAG AGGTGGTTAT GCTTGGTGAA ATTCCAAGAG AGGCAATAGA AAAATACACA
AGAGAGATTA ACAAAGAGAT TGATAGGAAG AGAGAAGAAT TTGGTTTAGA GCTTGCAAAA
GATTGA
|
|---|
| Protein sequence | MLRFKEAMKP FLRFVLILLF LLGLITKIIF AQGSSAKNLN VIFELISKES SYETYLSKFS
NKNRPEVVLV IPAVNYSAYS KDMELKKLTN LTQDKHPVLY MGENGFVEWT FNIEEEGLYN
IAVKYYPVPG KNSAIEREIL IDGKRPFNEA RIVRFERIWK DAGDPLRDNR GNELRPLQVE
FPMWVEKVID DSDGLYSEPF LFYFSKGRHT LRFVSVKEPV AIDYIKIFNL KDIPYYREVM
KEEHISKSNF KNIIVKIQGE KAHLKSEPTL YPVYDMSNPL NEPYSSKNKL LNIIGGYNWR
SAGQWIEWKF TVPESGFYKI GFKFRQNANP GIPSERTLYI DGVVPFREVR NIKFKYDTKW
QFKYLGDGKE DYLFYLKKGE HTLRLKVSYE SIAEIMRNVL QCSIDLSQLY TKIVMITSPN
PDPYRDYLLE QSIPDLIPTL ERNAKILKEN AEKLKILGGE KVSEAATLER VAIQLEGMAK
EPETIAQRLQ RYRDNLSALS AWVLAIREQP LDIDYIIIAS PDMKSPRVNP NILEAFLDGI
KKFFYSFLED YNMIGTVYDK EKAINVWVQM GRDQAETLKM LIDTDFTPKT GIGVNLNIIT
TEAALLFSVA SKENPPDVAL NVPRGLAVDY GIRGALVDIS KLSGFEEVKK QFAPYALVPY
SFGGKVYGLP MTQDFPIMFY RADILGRLNI EIPNTWEELY ETIAKLQSYN LQFAAGTGGT
SFDIFNMLLL QRGGRYYTED GKRCVLNNEE GVTAFKEWTN LYVLYGIPLY YDFFNRFRTG
EMPLGIGPYT MYNQFKVAAP EISGLWGIAP VPGRRKNDGS IDRSVAGGGN AILIFAQTKK
LKEAWEFVKW WVSTDVQARF GRELEAVLGA GARYNTANIE AMSYLPWPSS DYKILSTQWK
YLKEIPNVPG SYYVSRHLDN AFREVVMLGE IPREAIEKYT REINKEIDRK REEFGLELAK
D
|
|---|
| |