| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1580 |
|---|
| Symbol | |
|---|
| ID | 7082015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 1592136 |
|---|
| End bp | 1593356 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643458689 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_002353468 |
|---|
| Protein GI | 217967962 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2461] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGG TTTTTGGACT AAGGAAAGAA AGAAAAGAAA TGTTAAAAGA GTTGATAAGA
AAGATACACA AAGGAGAAGA TCCTGAAAAG TTAAAGACCC GGTTTAAAGA TATCTTTGGT
AGTGTAACTA CTACAGAAAT AGCGGAAATA GAACAGGAAT TAATACAAGA AGGAATGCCA
AGAGAGGAAG TAATGAGGCT ATGTGAAATA CATCTCAAGG TTTTTGAGGA GGCCTTGGAA
AAGGATAAAG TGGATTCGCA AGCAGGGCAT CCTGTAACTA TATTGATGTC GGAGCACAAG
AAGCTTATAG AGTTCTCAGA AAGATTAAAG AAAGCTGTTG AAGAGCTGAA ATTGGCTGGG
GATTTTGAAG AGGGTGAAGA TAAGCTACGG GAGATAATAG ATATAGTGGA CCATTTTAAA
GAGGCTGAAA AACACTATCT GAGAGAGGAA AATGTTTTGT TTCCCTATTT GGAAAAGCAT
GGTATAACAG AACCTCCTGC AATAATGTGG ATGGATCATG ATAAAATTAG AAGTATTAAA
AAGGGAATCT TTAACATGGT TGAGAGCTTT CAAGGTTTTT CTTTTGAGAA TTTTGTAAAT
ACTTTGCTAT ATAAAGCAGT TGAACTTGGA GATACTATGT CTTCTCATTT TTATAAAGAG
AATAACATCC TTTTTCCTAT GGGGCTTCAT GTAATAACAG AAGAGGAATG GAGAGATATA
AGAATTCAAT TTGATGAGAT AGGATATTGT TGTTTTACTC CCCCAGAAGT TTTAACTCCT
GTGGAAAGAA AAAAAGAAGT TTCTGTTCAA GTTGAAGACA AAATGAGACT TCCTTCAGGA
AGTTTTACCT TAGCTGAGCT TAAAGCAGTT TTAAACACTT TGCCAGTAGA TATAACTTTT
GTAGACAAAA ATGATGAAGT CAAGTATTTT AACGAAACTA AGGATAGAAT TTTTGTAAGG
ACAAGGGCAG TTATTGGGAG AAAAGTCCAA CAATGTCATC CACAGAAAAG CGTGCATATA
GTAGAAAAGA TACTTGATGA GTTTAAAAAG GGTACAAAAG ATCATGCAGA CTTTTGGATA
AATGTGAATG GGAGGTTAAT TTATATAAGG TATTTTGCGG TAAGAGATGA AGATGGAAAT
TACCTTGGTA CTCTTGAAGT TACTCAAGAT ATAACAGAGA TTAAAAAGAT TGAAGGAGAA
AGAAGATTAT TAGATTGGTA A
|
|---|
| Protein sequence | MSEVFGLRKE RKEMLKELIR KIHKGEDPEK LKTRFKDIFG SVTTTEIAEI EQELIQEGMP
REEVMRLCEI HLKVFEEALE KDKVDSQAGH PVTILMSEHK KLIEFSERLK KAVEELKLAG
DFEEGEDKLR EIIDIVDHFK EAEKHYLREE NVLFPYLEKH GITEPPAIMW MDHDKIRSIK
KGIFNMVESF QGFSFENFVN TLLYKAVELG DTMSSHFYKE NNILFPMGLH VITEEEWRDI
RIQFDEIGYC CFTPPEVLTP VERKKEVSVQ VEDKMRLPSG SFTLAELKAV LNTLPVDITF
VDKNDEVKYF NETKDRIFVR TRAVIGRKVQ QCHPQKSVHI VEKILDEFKK GTKDHADFWI
NVNGRLIYIR YFAVRDEDGN YLGTLEVTQD ITEIKKIEGE RRLLDW
|
|---|
| |