| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1535 |
|---|
| Symbol | |
|---|
| ID | 7081970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 1546430 |
|---|
| End bp | 1546930 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643458644 |
|---|
| Product | 16S rRNA processing protein RimM |
|---|
| Protein accession | YP_002353423 |
|---|
| Protein GI | 217967917 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
|---|
| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00265207 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTAAGAA TTGCTAAATT GGGTGAACCC TTTGGTATAA AAGGTGGTAT TAAGATTTGG
CCCTTCTTTG ACTTGATTGA TACTTTAAAG AAGGGACAGA AGATCTATTT GTCTTGGGGA
GATACTCTTT TAGTGAGAAG AGAACTCTCC TTGGAGAATA TAAGAGAACA TAATAAAGGT
TATGTTATTT ATTTTTCTGA AATAGAGACA AGAGAAGATG CAGAAAAGAT TAGAGGGAAT
TGGCTTTTAA TAGAGGAGGA GGATCTACCA AAACTTCCTG AGGGGCAGTA TTACACGTAT
CAGATAATGG GGCTCTCGGT ATACGAGGAA AGTGGTGAAT ATTTGGGGAA AGTTAAAGAG
ATACTTGAAA CTGGAAGTAA TGATGTATAT ATAGTTGAGG GAGAAGATGA AGATATATAT
ATTCCTGCTA TAAAAGATGT AATAGTTGAG ATAAATTTGG ACGAAGGAAA AATTATTATA
AGGAAAATGG AAGAGTATTG A
|
|---|
| Protein sequence | MVRIAKLGEP FGIKGGIKIW PFFDLIDTLK KGQKIYLSWG DTLLVRRELS LENIREHNKG
YVIYFSEIET REDAEKIRGN WLLIEEEDLP KLPEGQYYTY QIMGLSVYEE SGEYLGKVKE
ILETGSNDVY IVEGEDEDIY IPAIKDVIVE INLDEGKIII RKMEEY
|
|---|
| |