Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtur_1526 |
Symbol | |
ID | 7081961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dictyoglomus turgidum DSM 6724 |
Kingdom | Bacteria |
Replicon accession | NC_011661 |
Strand | - |
Start bp | 1537733 |
End bp | 1539823 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643458635 |
Product | DNA topoisomerase I |
Protein accession | YP_002353414 |
Protein GI | 217967908 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000864041 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAACG AAAAATTAAT CATTGTAGAA TCACCTGCAA AGGCTAAGAC TATAGAGAAG ATTCTTGGAA AAGAGTTTAA GGTTTTGGCT TCTTATGGAC ATATAAGGGA TCTACCAGAA AAGGAACTTG GAGTTGATAT AGAGAATAAT TTTAAACCCA AGTATGTGCT TTTACCTTCT CGAAAGAAAA TTATTGATAC TATTAAGGAT TTGTCAAAAA AGGCAGAAAA GTTGTATCTC GCTACAGATC CTGATAGAGA AGGGGAAGCT ATTGCTTGGC ATTTAGTAGA AGAATTAAAG CTTCCGAAGG AAAAATTTAC ACGAATAGAG TTTCATGAAA TAACTCCAAG GGCAATTCTT GAAGCAATAA AGAATCCAAG AGAAATAGAT CTAGATAGAG TTGAGGCTCA GCAAGCGAGA AGAATTCTTG ATAGGCTTGT GGGGTACGAG TTGAGTCCAC TACTTTGGGA AAAAGTAAGA AAAGGACTTT CTGCTGGCAG AGTTCAATCG GTGGCTCTTA GGTTTATATG TGAGAGAGAA GAAGAAATTG AAAAATTTAT TCCTGAAGAG TATTGGTATA TATATGGAGA ATTTAGAGAT GAAGAAAAAG TGCTATATGG AAAGCTTATT TTATATAAAG ATGAAGAGGT AAATGTTAAA AATGAACAGG AAGTAAATAA GATCATTAGA ATATTAAATT GTCTTGATTA TAGAATTGAC AAAGTTGTAA TAAAAGAAGA GAAAAGAACA CCACCGCCTC CTTTCATAAC CAGTACTCTT CAACAAGAGG CTTCAAAGAG GTTTGGTTTT CCTGTAGGAA AGACTATGAA GATAGCCCAA TCTCTTTATG AGGGAGTTGA TATAGGGAAT GAGAGAATCG GGCTTATAAC CTATATGAGG ACTGATTCTA CAAGAATTGC TCCTGAGGCA AGAGAGGAAG CTGTTCAATA TATTGAATCG GGCTTTGGAA AAGAATATGT GGGTAAGGAG CATAAGGAAA AGAAAAAATT AGGGGTACAG GATGCTCATG AAGCCATAAG ACCTACTTCT GTATTTAGGG ATCCTGAAAA AATTAGGAAA TATTTAACTG ATGAGCAATT TAAGATATAC AAGCTCATAT GGGAAAGATT TATAGCAAGC CAGATGAATC ATGCAATATT TGAGGTGGTG GAGATCTACA TAAAAGGTGG AGATTATGTA TTTCTTTCTA AGGGTAAGAA GCTGAAATTT GCAGGATTTA TGTCTCTTTA CATGGAGAAA GAAGAGAATG GAGAGGAAAA AGATGAAGTT AATATAGATT ATGTACCTGA GGAGGGAAAG AACGTAAAAC TGACAACTCT TATCCCAAGG CAATTTTTTA CAGAACCTCC TCCAAGATAT ACTGAAGCAA CTCTTGTTAG GACTCTTGAA AAATATGGTG TTGGACGGCC AAGTACCTAT GCTACAATAA TTGAGACTTT AAAAGAACGA AAATACGTAG AGGTTAAAGA TAGAACTCTT GTTCCAACAA CCCTTGGAAA GGTGGTAAAT GACTTTTTGA CAAAGCAATT TCCTCACCTT ATTGATGTAA AATTTACTGC AAGGATGGAG GAGGATTTAG ATAAGATAGA AAGTGGGAAG GTAAAGGCAA TTGAAGTGTT GAAAAAGTTT TATCCAGCTT TTAAAGAAGA GCTTGAAAAA GTATCAAAAA ATATTGGAAA AATTCAAGTG ATAGAAAAAA CTGATGAGAT TTGTCCTCTT TGTGGTAGTA AGTTGGTTAT AAGAGAGAAT AAAAATGGAA AGTATTATGC TTGTTCACGA TATCCTGAGT GTAAATACAC AAAACCTATA TATGAAGAGG CTCAAGGTAG ATGTCCACTA TGTGGTGGGG TTGTGGTAAA GAAAAAAGCA AAAAAGACAA AAAAGACTTT TTGGGGTTGT ATAAATTATC CTGAGTGTAG CTTTGCATCC CCTTATGAAC CATTAAATGA AAAATGCCCT CAGTGTGGAA GCACCATGCT TAAGGGGAAC GGATTTAAGA AATGCAGTAA TAAAGATTGT AATTATATTG TATGGACAGG GAGGAGAAAG AGATGGAAAA AGTCAAAATA A
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Protein sequence | MDNEKLIIVE SPAKAKTIEK ILGKEFKVLA SYGHIRDLPE KELGVDIENN FKPKYVLLPS RKKIIDTIKD LSKKAEKLYL ATDPDREGEA IAWHLVEELK LPKEKFTRIE FHEITPRAIL EAIKNPREID LDRVEAQQAR RILDRLVGYE LSPLLWEKVR KGLSAGRVQS VALRFICERE EEIEKFIPEE YWYIYGEFRD EEKVLYGKLI LYKDEEVNVK NEQEVNKIIR ILNCLDYRID KVVIKEEKRT PPPPFITSTL QQEASKRFGF PVGKTMKIAQ SLYEGVDIGN ERIGLITYMR TDSTRIAPEA REEAVQYIES GFGKEYVGKE HKEKKKLGVQ DAHEAIRPTS VFRDPEKIRK YLTDEQFKIY KLIWERFIAS QMNHAIFEVV EIYIKGGDYV FLSKGKKLKF AGFMSLYMEK EENGEEKDEV NIDYVPEEGK NVKLTTLIPR QFFTEPPPRY TEATLVRTLE KYGVGRPSTY ATIIETLKER KYVEVKDRTL VPTTLGKVVN DFLTKQFPHL IDVKFTARME EDLDKIESGK VKAIEVLKKF YPAFKEELEK VSKNIGKIQV IEKTDEICPL CGSKLVIREN KNGKYYACSR YPECKYTKPI YEEAQGRCPL CGGVVVKKKA KKTKKTFWGC INYPECSFAS PYEPLNEKCP QCGSTMLKGN GFKKCSNKDC NYIVWTGRRK RWKKSK
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