| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1511 |
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| Symbol | |
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| ID | 7081946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dictyoglomus turgidum DSM 6724 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011661 |
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| Strand | + |
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| Start bp | 1521401 |
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| End bp | 1524580 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643458620 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_002353399 |
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| Protein GI | 217967893 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATTC TGTTAGAAAA GATCATAAAA AGTAGCGAAT TCAATACTCT TGAGAAAGTA
ATTAACTCTA AAAATCGTCT CAAAATTTTC GGAATATACA AGGGTATTTA TCCTCTATTT
CTTTTATACC TAAAAAGATA TGAAAAACCC GTTTTATGGA TAACCAATAA CGAAGAAGAT
CTGAATATAT GGGAAGATTT ACAGGAAGAT TTAGAAATAA GTATATTACC CTCTTATGTG
CATCTTCCTT ATGAGCGACC TTTAAGATCT CCTCAGATTC AAGGAAAAAG ATTGAGAGCT
ATCTCAAATA TAATTTACGA TAAAAATTTT TCCATTATTG CTTCTTTAAA ATCCTTAATT
TATCCAATTA TCCCCAAGGA TGTCTTAAAA GAGAGAATCA TAAAAATAAG AATCGGAGAA
GAAATAGCTC GAGAAAAAAT AGAAAAATAC CTGGCAGAAA ATTTTTATCA AAGATTACCT
CAAGTAGAAA AAATTGGAGA CTATAGCATA AGGGGTGGAA TTCTAGATAT ATTCTCTCCT
ATATATGAGA ATCCTATAAG AATAGAATTT TTTGGAGATG AGATTACTTC TATAAGATTT
TTTAATTTGG AAGACAAAAG ATCTATAGAA ACAACAAAAG AAGTATTTAT AACTCCCATT
TCAGAGCTTA TTGCAAATAA AGATGAAGAG AAATACTTTT TAAAAAATAA AGAGCTTAAA
AAGTATATCT TTTCATATCT TCCCCCAAAT ACCATCTTAA TCTTTGAAAA TTACGATGAA
AGCCTTGCTC TAATCCAAAA ATGGACGGAA AAAGGATTAG CAAATCTTGA AAAAAGAAGG
ACTAAAGAAA ATCTTCCAGA AGATTTATAT CTTACTAATT CTTTATTAGA AAGTTATACT
TCCCATTACC AAGTATTAGA TCTGAATAGT AAAGATGCAG ACATTGCATT TTCCATATAT
TCACCTCCCT CTTACCAAGG TACCAATGAG TTTTTTGAAA AAAACATAAA ATCCTTCGTT
TATGATGGAT GGGAAGTATA CATTTCATCG GAACATCAAG ATATCGTAAG GACAAGGCTT
AAGAATTTAA ATGTGAAATA CTTGGTTGGA GAAAAGATAA GAGAGGGTTT TTTATGGGAA
AAGGAAAAAA TTCTTGTAAT TACTGATTAT GAGATCTTTG GGAAAAAAAG GAAAAGAAAA
GTTATAAGAT ATGAAAAAGG ACTAAAACCC AAGGACTTAT ACCTTTTAAA AGATGGCGAT
TATGTGGTTC ATGTAAACTA CGGTATAGGA ATATTTAGAG GACTAAAAAA ACTTAAAGTA
GACGAACTAG AAAAAGAATT TATATACATT GAATATGCTA ACAATAGCTT TCTATATGTT
CCATTAGAAG AAATGCATCT TATCCAAAGA TATGTATCCT CCTCTCCCGA CCCACCACAG
ATAAGTAGAT TAGAATCTCG CCAATGGGAA GAAACAAAAC GAAAAGTAAA AGAATCAGCG
AAAGAGATCG CTGAAGAATT ACTAAAAATC TATGCTCAAA GGGAAATCAC TAAGGGCTTT
GCTTTTTCTC CTGATAGCCC ACTTCAAGAA GAACTTGAAG CAAGCTTCCC TTATATAGAG
ACAGAAGACC AAATAAAAGC TCTTAGAGAG ATAAAAAAGG ATATGGAATC TACAAAACCT
ATGGAAAGAG TGCTTATTGG AGATGTAGGT TTTGGCAAAA CAGAGCTCGC CTTAAGGGCA
AGTTTTAAGG CAGTGCTTGA TGGAAAACAA GTAGCAATTC TTGTACCAAC CACAATTCTT
GCTTATCAAC ATTGGAAGGT ATTCAAAGAA AGGTTAGAAG TTTTTCCTGT AAATGTAGAA
ATCTTGAGCA GGTTAAAACC TAAATCGGAG CAAAAAAGAA TAATAGAGAA GATAAGAAAG
GGAGAAATAG ACATAATAAT TGGAACCCAC AGAATTCTAC AAAAAGATGT GGAATTTAAA
GATTTGGGCC TAATAATTGT AGATGAAGAA CATAGATTTG GAGTACTACA AAAAGAAGCC
TTTAAAAAGA AATATCCCCA TGTAGATATT CTTTATCTCT CAGCAACGCC TATTCCAAGA
ACTTTATCCA TGGTTCTTTC TGGAATAAGA CAATTTTCAG TACTTGAAAC TCCACCTGAA
AATCGCTTAC CTATTCAAAC CTTTGTAGTG GAATATAATC CTGAAATTAT TCAAGAAGGA
ATAAGGAGAG AATTAGAAAG AGGAGGACAG GTATATTATG TGTGTAATGA CATAGAAAGA
TTAGAAAAAA TAAGAGAAGA ACTATCAAAA CTCGTTCCAG AGGCAACTTA TGCTATAGCC
CATGGCAAAA TGGACGATGA AAAATTAACA GAAGTTATGA GTAATTTTTA TGATGGAAAA
ATAGACGTTC TGGTTGCCAC TACCATAATA GAATCAGGCA TAGATGTCCC TAATGCAAAT
ACACTGTTTG TGGAAAATGC AGAACATATG GGACTTGCTC AGCTATATCA ACTTCGTGGA
AGAATTGGAA GATCCTATAA ACAAGCTTAT GCCTATTTTT TGCATGCCCC TCTAAAGAAA
TTATCCCTTG AAAGTATAAA AAGACTTGAA GCTTTAAAAG AATTCTCAAG CCTTGGATCT
GGTTTGAGAC TTGCCTTAAG AGATCTTGAA ATAAGAGGTG CAGGAAAGAT CCTTGGAAAA
GAACAACACG GACATATAAA CTCTGTTGGG TTTTATTTAT ATCTTCAACT CTTAGAAGAG
GCAATCAATG AATTAAAAAG CAATAAAGAA GGAAGTGAAA AAAATAAAAT AAATTGCCAT
ATTATACATC CATTTCCAGC AATTATACCC GAATACTATA TAAGTCAAAG CAGTGATCGT
ATATACTACT ATCAAAAGTT GGCTCATCTT GAAGATATTA ATGATATAGA AAAAATAAAA
AAGGAAATGG AAGATATTTA CGGACCTATT CCAGATTCTG TTGAGAATTT ATGTCTTCTC
TCTCAGATTA AATTTTTTGC TGAAAAAATA GGAATAGAAA AAATTGAAAT ATCTGAAAAC
CAGGTAAAAC TAACATATTC AAAGGGTATT GAAAGAACCT TAAATTTACC TAAAGGGGAT
TATAGAAAAA AAGCCCAATT TCTACTCCAA TTTCTCAAAG ATATCTCCAA TATTAAGTAA
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| Protein sequence | MSILLEKIIK SSEFNTLEKV INSKNRLKIF GIYKGIYPLF LLYLKRYEKP VLWITNNEED
LNIWEDLQED LEISILPSYV HLPYERPLRS PQIQGKRLRA ISNIIYDKNF SIIASLKSLI
YPIIPKDVLK ERIIKIRIGE EIAREKIEKY LAENFYQRLP QVEKIGDYSI RGGILDIFSP
IYENPIRIEF FGDEITSIRF FNLEDKRSIE TTKEVFITPI SELIANKDEE KYFLKNKELK
KYIFSYLPPN TILIFENYDE SLALIQKWTE KGLANLEKRR TKENLPEDLY LTNSLLESYT
SHYQVLDLNS KDADIAFSIY SPPSYQGTNE FFEKNIKSFV YDGWEVYISS EHQDIVRTRL
KNLNVKYLVG EKIREGFLWE KEKILVITDY EIFGKKRKRK VIRYEKGLKP KDLYLLKDGD
YVVHVNYGIG IFRGLKKLKV DELEKEFIYI EYANNSFLYV PLEEMHLIQR YVSSSPDPPQ
ISRLESRQWE ETKRKVKESA KEIAEELLKI YAQREITKGF AFSPDSPLQE ELEASFPYIE
TEDQIKALRE IKKDMESTKP MERVLIGDVG FGKTELALRA SFKAVLDGKQ VAILVPTTIL
AYQHWKVFKE RLEVFPVNVE ILSRLKPKSE QKRIIEKIRK GEIDIIIGTH RILQKDVEFK
DLGLIIVDEE HRFGVLQKEA FKKKYPHVDI LYLSATPIPR TLSMVLSGIR QFSVLETPPE
NRLPIQTFVV EYNPEIIQEG IRRELERGGQ VYYVCNDIER LEKIREELSK LVPEATYAIA
HGKMDDEKLT EVMSNFYDGK IDVLVATTII ESGIDVPNAN TLFVENAEHM GLAQLYQLRG
RIGRSYKQAY AYFLHAPLKK LSLESIKRLE ALKEFSSLGS GLRLALRDLE IRGAGKILGK
EQHGHINSVG FYLYLQLLEE AINELKSNKE GSEKNKINCH IIHPFPAIIP EYYISQSSDR
IYYYQKLAHL EDINDIEKIK KEMEDIYGPI PDSVENLCLL SQIKFFAEKI GIEKIEISEN
QVKLTYSKGI ERTLNLPKGD YRKKAQFLLQ FLKDISNIK
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