Gene Dtur_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1484 
Symbol 
ID7081919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1494495 
End bp1495382 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content41% 
IMG OID643458593 
Productpyridoxal biosynthesis lyase PdxS 
Protein accessionYP_002353372 
Protein GI217967866 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0214] Pyridoxine biosynthesis enzyme 
TIGRFAM ID[TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.898555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTCT TTACAGGAAC AGATAAAGTA AAAAGAGGTT TGGCTCAGAT GCTAAAAGGC 
GGAGTAATTA TGGACGTGAC TAACGCTGAG CAGGCTGAAA TTGCTGAAGA GGCTGGTGCT
GTGGCTGTTA TGGCTCTTGA AAGAGTTCCT GCTGACATAA GGGCAGAAGG TGGAGTAGCA
AGAATGGCAG ATCCTAAAAA GATAAAGGAG ATTATGTCAG CAGTTAGTAT TCCTGTTATG
GCGAAAGTTA GGATTGGTCA TTTTGTGGAG GCTCAAATTT TAGAAGCTCT CGGGGTAGAT
TTTATTGATG AAAGTGAGGT TTTAACTCCT GCCGATGAAA AATATCATAT AAATAAACAC
GCTTTCAAAG TTCCTTTTGT TTGTGGTGCT AGGGATTTGG GAGAAGCTCT AAGAAGGATT
GCAGAGGGAG CAGCTATGAT TAGGACAAAA GGAGAGGCGG GAACAGGAAA TGTGGTAGAG
GCGGTACGTC ATATGAGACA AATTATGGAC GAGATAAGGT CATTAGTTCT TCTCCCCGAC
GAAGAATTAG TGGCAAAAGC AAAAGAATTA GGGGCTCCAT TAGATCTTAT AATAGAGACA
AAAAAATTAG GAAGACTTCC TGTAGTGAAT TTTGCTGCTG GTGGTATTGC TACTCCTGCT
GATGCTGCTT TAATGATGCA TCTTGGCGCT GATGGAGTGT TTGTAGGATC TGGAATATTT
AAATCAAAGA ACCCAAGAAA GAGAGCAAGA GCCATAGTTC TTGCTGTTAC TTATTATGAT
GATCCTTATG TATTGGCGGA GATATCGGAG GATTTAGGAG AGCCAATGCC TGGTATTGAT
GTAAGAAAGC TATCTGAAAG TGAATTATTG CAGGTGAGAG GTTGGTAA
 
Protein sequence
MQVFTGTDKV KRGLAQMLKG GVIMDVTNAE QAEIAEEAGA VAVMALERVP ADIRAEGGVA 
RMADPKKIKE IMSAVSIPVM AKVRIGHFVE AQILEALGVD FIDESEVLTP ADEKYHINKH
AFKVPFVCGA RDLGEALRRI AEGAAMIRTK GEAGTGNVVE AVRHMRQIMD EIRSLVLLPD
EELVAKAKEL GAPLDLIIET KKLGRLPVVN FAAGGIATPA DAALMMHLGA DGVFVGSGIF
KSKNPRKRAR AIVLAVTYYD DPYVLAEISE DLGEPMPGID VRKLSESELL QVRGW