Gene Dtur_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1335 
Symbol 
ID7083301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand- 
Start bp1353554 
End bp1354228 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content33% 
IMG OID643458436 
ProductRhomboid family protein 
Protein accessionYP_002353223 
Protein GI217967717 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.931204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCTC TGCGAGATGA TATACCGTCT CGAAGGTGTC CTATAGTTAA TATGACTCTT 
ATCTTCTTGA ATATTTTTGT TTTTTTATGG GAGATGTTAT TACCTCAAAG GGTCTTAGAA 
AGTATAATAT TTAAATATGG GGTAGTCCCA TATAGGTTTT TCAGTTTAAA TTTACTTCCT 
CATGGGATTT TAACCCTTTT TACTTCTATG TTTTTACACG GTGGATGGTC TCACATCATT 
GGTAACATGC TTTATTTGTA TATATTTGGT GACAATGTAG AGGATGCTAT GGGGCATTTT 
AGATATCTTG TTTTTTATCT TCTTTCTGGA ATTCTTGCTG GGTTGACTCA AATCTTCTTT 
AATACTAACC CTTATATGCC TGCTATAGGA GCGAGCGGAG CGATTGCAGG TGTTTTAGGA 
GCATATATGA GATACTTTCC CTTAGCGAAG GTTCTAACTA TGACTTTTTT TGTATTTTTT 
ATAGATTTTA TTTATATCCC TGCTTTTTTA TATATAGGTC TTTGGTTTAT AATGCAAATT 
TCATCAGGGA TATTCTCTCT TTTAATTAAT ATTAGTGGTG GAATAGCTTG GTGGGCACAT 
ATTGGGGGGT TTGTTTTTGG TTTCATCTTA GCAAAGCATT TTAGGAGAAG AAGATATTGG 
GTTTATTACT ACTAA
 
Protein sequence
MIPLRDDIPS RRCPIVNMTL IFLNIFVFLW EMLLPQRVLE SIIFKYGVVP YRFFSLNLLP 
HGILTLFTSM FLHGGWSHII GNMLYLYIFG DNVEDAMGHF RYLVFYLLSG ILAGLTQIFF 
NTNPYMPAIG ASGAIAGVLG AYMRYFPLAK VLTMTFFVFF IDFIYIPAFL YIGLWFIMQI 
SSGIFSLLIN ISGGIAWWAH IGGFVFGFIL AKHFRRRRYW VYYY