Gene Dtur_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1284 
Symbol 
ID7083248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand+ 
Start bp1301570 
End bp1302253 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content31% 
IMG OID643458387 
Productintegrase domain protein SAM domain protein 
Protein accessionYP_002353176 
Protein GI217967670 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0235313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACC AAGTTAAATC CTGGAAATCC CTCCTTGATA ATTTTTTCTT TGTCTCCCAA 
GTGAATGGTA AAAGACCTAA AACCCTTCAG TGGTACAAAG AAACTTTAAT TCCCTTCACT 
AAGTCTGTCC CCTTAGAAGA GCTTTCTGTT TACTCTATCC AGAAATATAT TTCATCCCTT 
AGAGAAAGGG GACTAAAGCC TGCCTCTATT GACACTCACA TTAGAGCTAT AAAATCTTTT 
CTTCACTTCC TATATGATGA AGGATATTTA GAAGAAAATA TTTCAGCAAA AATTAAAAGA 
TATAAACTTC CAAAAAGTTA TCCTCATATT TTAAACGATG AACAAATACT TAATTTACTC 
AAGGTTTGCG ATAAAAAATC ATGGGATAGT TTTAGAAATT ATGTAATTGT TCTTACCTTT 
TTAGATACTG GGATAAGGCT ATCTGAACTT TTAAACCTCA CTGTAAATGA TGTAAATTTA 
CCCAAAAGGA GTATTTTCAT TAGAAGTGGA AAGGGAGAAA AAGATAGAGA AGTTTACATG 
GGAAAGACTC TTGTAAGGGA GATGGCAAAG TGGTTAAAAA TGAGAGGATA TTTTCCATAT 
GAAGAAAGAG TATTTATTAC AAAACAAGGA TATCCTCTAA ATAAAAGAGG AGTAGAAAGG 
ATATTTACAA AGATACCTAA ATAA
 
Protein sequence
MKNQVKSWKS LLDNFFFVSQ VNGKRPKTLQ WYKETLIPFT KSVPLEELSV YSIQKYISSL 
RERGLKPASI DTHIRAIKSF LHFLYDEGYL EENISAKIKR YKLPKSYPHI LNDEQILNLL 
KVCDKKSWDS FRNYVIVLTF LDTGIRLSEL LNLTVNDVNL PKRSIFIRSG KGEKDREVYM 
GKTLVREMAK WLKMRGYFPY EERVFITKQG YPLNKRGVER IFTKIPK