Gene Dtur_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1259 
Symbol 
ID7082743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1278365 
End bp1279717 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content38% 
IMG OID643458359 
Producttryptophan synthase subunit beta 
Protein accessionYP_002353151 
Protein GI217967645 
COG category[R] General function prediction only 
COG ID[COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) 
TIGRFAM ID[TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000240862 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAGG TCAAATTTAT TCTTGACGAG TCTAAAATAC CTAAGGATTG GTACAACATT 
ATTCCTGATC TGCCTTTTCC TCTTCCCCCG GTCTATCATC CTGTGACCCT GCAACCAGTA
AAACCTGAGG ATCTTGCACC TATTTTTCCT GTGGAGCTTA TAAAGCAGGA GGTGAGTACA
GAGAGATATA TTGAAATTCC CGAAGAAGTA AGGAAAATAT ACAAGTTATG GAGACCAACT
CCTTTGTATA GGGCTCTTAA TTTAGAGAAA TATTTGGATA CTCCAGCTCA TATATATTAT
AAATACGAGG GAGTAAGCCC TCCTGGAAGC CATAAGCCAA ATACTGCTGT AGCTCAGGCC
TTTTATAACA AGCTTGAAGG GGTTAAGAGA TTAACTACAG AGACTGGAGC AGGACAATGG
GGCTCAGCTC TTGCTATGGC TTGTAATTTC TTTGGGTTAG AATGTAAAGT CTATATGGTT
AAAGTAAGTT ATTATCAAAA GCCATATAGA AGATCCTTGA TGGAGATCTG GGGAGCTAAA
GTAGTACCAA GTCCAAGTCC TGATACTGAG TCAGGGAGAA GGATATTAGA ACAAGATCCT
GACTCTCCGG GATCCTTAGG AGTTGCTATA AGTGAGGCAG TGGAAGATGC AGTTAAAAGG
GATGATACAA AATATTCCCT TGGTAGTGTA TTAAATCATG TCTTACTTCA TCAAACTGTG
ATAGGAGAAG AGGCTTTATT ACAAATGGAG ATAGCAGGAG AGTTTCCTGA TGTAGTTATA
GGTTGTGTAG GAGGAGGAAG CAATTTTGCA GGTATTTCTT TTCCTTTTAT AAGAGAAAAA
TTTAAAGGTA AAAAAATAAG AATTATTGCA GTTGAACCAG AATCATGTCC AAGTTTGACT
AAGGGAGTTT ATACCTATGA TTATGGAGAT GTAGCTAAGA TGACTCCTCT TCTCAAAATG
TATACCTTGG GGCATAATTT TATACCTCCT GCTATACATG CTGGAGGACT TCGTTATCAT
GGTATGGCTC CTTTGGTTAG TGCTTTATAT CACCATGGGT ACATAGAAGC TGTAGCTTAT
CCCCAGACAA AAGTATTTGA AGCAGGAGTG ATCTTTGCAA AGACTGAGGG TATTGTACCT
GCTCCAGAAT CCACTCACGC TATTAGAGCT GTCATCGATG AGGCTTTAGA TGCAAAAGAA
AAAGGAGAAA AGAAAGTAAT ATTATTTAAT TTGAGTGGAC ATGGATTCTT TGATTTGTCT
GCTTATGATC AATATCTTTC TGGAAAACTT GAAGACTATT TCTATCCAAA AGATAAGGTT
GAAGAGGCAT TGAAAGAACT ACCTAAGATC TAA
 
Protein sequence
MSKVKFILDE SKIPKDWYNI IPDLPFPLPP VYHPVTLQPV KPEDLAPIFP VELIKQEVST 
ERYIEIPEEV RKIYKLWRPT PLYRALNLEK YLDTPAHIYY KYEGVSPPGS HKPNTAVAQA
FYNKLEGVKR LTTETGAGQW GSALAMACNF FGLECKVYMV KVSYYQKPYR RSLMEIWGAK
VVPSPSPDTE SGRRILEQDP DSPGSLGVAI SEAVEDAVKR DDTKYSLGSV LNHVLLHQTV
IGEEALLQME IAGEFPDVVI GCVGGGSNFA GISFPFIREK FKGKKIRIIA VEPESCPSLT
KGVYTYDYGD VAKMTPLLKM YTLGHNFIPP AIHAGGLRYH GMAPLVSALY HHGYIEAVAY
PQTKVFEAGV IFAKTEGIVP APESTHAIRA VIDEALDAKE KGEKKVILFN LSGHGFFDLS
AYDQYLSGKL EDYFYPKDKV EEALKELPKI