Gene Dtur_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1212 
Symbol 
ID7082687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1228275 
End bp1229141 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content31% 
IMG OID643458305 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_002353105 
Protein GI217967599 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.977984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGGT TTATACTCAT AAATAAGCCA CCGGGAATAA CTTCTTTTGA TGTAGTAAAA 
AAAGTAAAAA GACTTTTTAA AGAGAAAAAA GTAGGACACA TGGGAACATT AGATCCCAGG
GCATGTGGAC TATTAATAAT AGGATTGGGA AAATATGTAA GATTAGAGGA ATATATTTTA
AGACTTCCCA AGACTTATAT AGTGGAAATT TTGTTTGGAG TTTCTAGTGA CACTTATGAT
AGGGAAGCCT ATAGTTTTTT TTATGAAAAG GAAAAAAAAC AAATTGATTT AAGAGAGTTA
GAAGATGTCT TAAAATATTT CATAGGAGAA ATAGAACAAA CTCCTCCTCC CTACTCTGCC
ATCCATATTG ACGGAGAAAG AGCTTACAAC TTGGCAAGAA AAAACATATC CATAAATCTT
CCTAAAAGAA GGGTTATAAT ATATGAATCC AAAATTCTTG ATTTTAATAA AAGTATGAAC
AAAGCGTTAA TTGAATTTAA AGTCTCATCA GGAACTTATA TAAGAAGCCT TGTAAACGAT
ATAGGCAAGA AGCTAAACAT AAAAGCGTTA GTATCCTTTT TAGTACGAAC TCAAATAGGA
CACTTATCAG TAAATCAAAG TGTTTCTTAT AGTAAATTAA AGGAGACGGA GATAAATAAT
TTATTACTAT CCCCTATAGA AGTATTAAGT TTCCCGGTTT ATCAGACTTC TAAAGATGAA
GAAAAAAAGA TATTAAATGG AAATAGCATA GAATCAAGAC TTTTCCAAGA TGGAGAGTAT
GTCTCTCTGA TCAATGCTCA AAATAGGTTC ATAGCAGTAG GTAAAGTAAT AGGAAATACA
ATAAAACCTG AGAAGGTATT CCCTTAA
 
Protein sequence
MNGFILINKP PGITSFDVVK KVKRLFKEKK VGHMGTLDPR ACGLLIIGLG KYVRLEEYIL 
RLPKTYIVEI LFGVSSDTYD REAYSFFYEK EKKQIDLREL EDVLKYFIGE IEQTPPPYSA
IHIDGERAYN LARKNISINL PKRRVIIYES KILDFNKSMN KALIEFKVSS GTYIRSLVND
IGKKLNIKAL VSFLVRTQIG HLSVNQSVSY SKLKETEINN LLLSPIEVLS FPVYQTSKDE
EKKILNGNSI ESRLFQDGEY VSLINAQNRF IAVGKVIGNT IKPEKVFP