Gene Dtur_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1197 
Symbol 
ID7082673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand- 
Start bp1216670 
End bp1217809 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content32% 
IMG OID643458290 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_002353090 
Protein GI217967584 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA GGATAATCAT ATTTGGAGCA ACTGGCTCAA TAGGGACGCA AACCCTTGAA 
ATTATAGACA AAAATAAAGA TAAATTTGAA CTCATAGGAG TAGCCTCAAA GGGTAACGTT 
GACAAATTAA AAGCAATTGC AGAAAAATTC AAGGTACCTT ATGTTGCCCT ATTTGACAAT 
AAGCCTTTTT CTTTATCTTA TAATGCAAAG ACTTTTTATG GTAAAGAAGG ATTAGAACAA 
CTTGCAAACT TAGATTCAGA TCTTGTAATA ATGTCTATTT CAGGTATAGA AGCAGTTTAT 
CCTTTGAAAA TTTCCATAGA GAGAGGTGCA AATATTGCTA TTGCTACTAA GGAGATTGTT 
GTGGCATGCG GGGATTTAAT AAAAAAGTGG TTAAAAAAAT CAAAGTCAAA ACTTATACCT 
ATAGACAGCG AGCATAGTGC TTTATTTCAA TTGATAAACT CTTTTAGGAA GAAGAATATT 
GAAAAAATAA TTTTAACAGC ATCAGGAGGT CCTTTTTGGA ATAAGTCAAG AGAAGAAATG 
GAAAAAACTA AGTTAGAAGA AGTATTGAAA CATCCTACCT GGAAAATGGG ATACAAAACT 
ACTATTGATT CTGCTAATTT AGTAAATAAA GGTTTAGAGG TAATTGAAGC TCATTTCTTC 
TTTAATTTTG ATTATAACTC TATTAAAGTA ATGATTCATC CTCAAAGTAT TGTACATGGT 
ATGATAGAGC TTGTGGATGG CTCTATTATA GCCCAAATGG CATATCCAGA CATGAGGATA 
CCAATACAGT ACGCCTTATT CTATCCTCAA AGACCCAAAA TAAAATGGAG TCCTTTTGAT 
TTAAAGAACC AGAAACTTGA ATTTTACGAT GTGGATTATG ATAAGTTTCC CGCTTTACAA 
CTGGCTTATG AAGTGGGTAA GAAAGGAGGA GTCTATCCTG CTATATTTGC TATATCTGAT 
GAAGTTTTGG TGGAACTTTT TATAAAGGGT ATTATTAATT TTAAAGACAT AGTGTCTTTC 
ATCAAATATG CATTAGAGTC CTGGAAAGAA TTTAAAGAAA TTGAAAATCT TGAACAAATT 
GAATACATTA AAAACTGGAT CAAAAATCTA ATAAAGCAAA AGGTGGGGTA TAACCTATGA
 
Protein sequence
MRKRIIIFGA TGSIGTQTLE IIDKNKDKFE LIGVASKGNV DKLKAIAEKF KVPYVALFDN 
KPFSLSYNAK TFYGKEGLEQ LANLDSDLVI MSISGIEAVY PLKISIERGA NIAIATKEIV 
VACGDLIKKW LKKSKSKLIP IDSEHSALFQ LINSFRKKNI EKIILTASGG PFWNKSREEM 
EKTKLEEVLK HPTWKMGYKT TIDSANLVNK GLEVIEAHFF FNFDYNSIKV MIHPQSIVHG 
MIELVDGSII AQMAYPDMRI PIQYALFYPQ RPKIKWSPFD LKNQKLEFYD VDYDKFPALQ 
LAYEVGKKGG VYPAIFAISD EVLVELFIKG IINFKDIVSF IKYALESWKE FKEIENLEQI 
EYIKNWIKNL IKQKVGYNL