Gene Dtur_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1169 
Symbol 
ID7082645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1189900 
End bp1191102 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content34% 
IMG OID643458262 
Producttype II secretion system protein 
Protein accessionYP_002353062 
Protein GI217967556 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTTCTT ATAGATATGT AGCAAAAGAT CTCCAAGGGA AAATATATAA AGGTATATTA 
GAAGCTTCTT CTGAAAGAGA AGTAAGAAAA CTTTTAAAGG CAAGAAAATT ATATGTAGTT
TCTATAAAAA AAGAAACAGG ACTTTGGAAA ACCCTCACTT ATAAGAAAAA AGTTACCCTT
CCTGAATTAG TACTTTTTAC TTCTCAATTT GCCACTCTCC TTAGATCTGG GATTATCTTA
ACTGAGTGTT TATCAACCCT TGCATCTCAA ACTGATAATG CCTACTTTAA AGATGTACTC
CTTGATGTGA GAAAGAATGT AGACGCTGGG TTGAGCCTTT CTGAAGCCCT ATCTAAATAT
CCTGATGTAT TCCCAAAAAT ATTTATAAGC CTTGTGAGAA CAGGAGAGGT TACAGGAAGC
CTTGATTTAA TGTTGGATAG ACTTTCCAAA TATTTTGATT CCCAACATGA GCTTAGAGAG
AAAATAAAAT CTGCAACTAC CTATCCCACC ATTGTTATAA TTGCAGCCAT AGTGGTGGTA
ATCTTTATGT TGACTTTTGT GGTCCCAACC TTCCAAAGAA TTTATGGAAG AACCAATGTT
CCTCTTCCTT TTCCTACAAG AATTACCATT TTTCTTGGCA ATTTTGTAAA AAATAATATC
TTGATTATAT TAGTCCTTTT AGCTCTTCTT ATTGCGGGAG CAAGACAAAG TTTAAGAAAC
AAAAAAATAA AAAGATGGTG GGATGAAAAT AAGTTGAAAA TCCCTAAGAT AGGAAAATTA
TGGAGACAAG TGCTTCTTAC AAGATTTTCT GGTACCTTTT ATGTCCTTCT CACAGGAGGT
ATTTTGATAA CCCAATCTTT GGAAATATTA GAGGATGTAA TAGGAAATCT ATATTTTTCA
GAACATTTAA GAAAAATACT CTCGGGAGTC CTCGAGGGAA GAAACCTATC GGATATGATG
GACGAAGAAG TTTTTACTCC TCTCTTAAAA CAGATGGTAG TAATAGGGGA GAGAAGTGGT
AGACTTGATA CCATGTTAGA AGAATATACA AAATTTGCAG AAAGAGAAAT AGATATAGCT
ACAAAAAGAC TTACCGCTAT GATTGAGCCT GCCTTGACCA TATTCTTGGG GGTTGTGGTA
TTCTTTATTG CCATCTCCAT GTATCTTCCC ATGTTCAATA TGGTAAGACT CTTTAGAAGA
TAA
 
Protein sequence
MPSYRYVAKD LQGKIYKGIL EASSEREVRK LLKARKLYVV SIKKETGLWK TLTYKKKVTL 
PELVLFTSQF ATLLRSGIIL TECLSTLASQ TDNAYFKDVL LDVRKNVDAG LSLSEALSKY
PDVFPKIFIS LVRTGEVTGS LDLMLDRLSK YFDSQHELRE KIKSATTYPT IVIIAAIVVV
IFMLTFVVPT FQRIYGRTNV PLPFPTRITI FLGNFVKNNI LIILVLLALL IAGARQSLRN
KKIKRWWDEN KLKIPKIGKL WRQVLLTRFS GTFYVLLTGG ILITQSLEIL EDVIGNLYFS
EHLRKILSGV LEGRNLSDMM DEEVFTPLLK QMVVIGERSG RLDTMLEEYT KFAEREIDIA
TKRLTAMIEP ALTIFLGVVV FFIAISMYLP MFNMVRLFRR