Gene Dtur_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1128 
Symbol 
ID7082603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1146477 
End bp1148423 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content35% 
IMG OID643458220 
Productpenicillin-binding protein, 1A family 
Protein accessionYP_002353021 
Protein GI217967515 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA AGTATGTGAA AGAGATAAAA ATAAGTGGAA ATAAAAAAAG AAAAAATTTT 
ATATATGTTC TTCTGGGGAT TTTCAGTTTT ATCTTGATTC TTTTGGTTGG AGTTTCTATT
TACGTATTGA CGGTAATTAG AGATATACCT CCAATAGATA GATGGGTGGA GATCAAACCA
AGCCAAACCA CTATAATCTA TTCCATAGAC AATAAGATTT TAGGAAGACT GTATAAGGAA
AATCGTATAT ATGTTCCACT CTACAAAATA TCTCCTTATC TTCAGCAAGC AGTAGTAGTC
TCAGAAGACA AAGAATTTTA TACTCATTCA GGAGTAAGCA TAAGAGGATT AGTAAGAGCA
ATCCTTGTGG ATCTTTTACA TTTAGAAAAA AAACAAGGAG GAAGTACTAT TACCCAGCAA
GTTGCAGAGC TTCTTTTTCT GTCTCCCGAA AGGACTATAA ATAAAAAGAT CAAAAAAATT
TATATAGCTA CAAAATTAGA GAAATATTTT ACAAAACAGC AAATTCTTGA AATGTATTTA
AACTTAATAT ATTGGGGACA TGGGAATTAT GGGGCAGAAG CTGCCTCCCA ATACTATTTT
GGAAAAAGTG CTTCTGATTT AACTATACCA GAATCTGCAT TACTCGCAGC TATCATTCCT
GCTCCAGAAC TTCTTTCTCC TTATAAAAAT CCCGATAAAG CTTTAATGCT AAGAAATATA
GTAATTGAGA AACTGTATCA AGAGGGTTAT ATAAACCAGG CCGATTATGA AAAGTCAATC
AAAGCACCTT TAGGAATAAT TAAGAGAGAT GATGATTCTC CTCAGGCAAA AAATATTGCT
CCTTATTTTT TTGATTATGT CCTAAAAGAG CTAATAAACA AATTTGGAAA AGATATGGTG
TATAGCGGTG GACTTAAGGT CTACACTACC TTGGATACGA ATCTCCAAAG CTACGCAGAA
GCCTCTCTTA AAAAGATCAT TGAACAATAT GGTAAAAAGT ATAAAGTAAG TCAAGGTGCA
TTGCTTGCTA TTGATCCTAA CACAGGATAC ATAAAGGCAT GGGTTGGAGG GATAGACTAC
TCGAAAAGTC AATTTGATAG GGTATCTATG GCTGTAAGAC AACCTGGTTC TGCTTTTAAA
CCTTTTGTAT ATCTCACCGC TATACAAAAG GGATTTAAAC CATATGATCT TATTGAAGAA
AAAGAGGTAA CTTACACTTT TAACAAGAAA ATATGGAAGC CTAAGAATTA TGATGGAAAA
TTACATGGAA CAATCACCCT CCAGGAAGCT TTAGAAAATT CATACAATCT AGCTACTATT
CTCTTGCTGG AAGAAGTAGG CGTTGGAGAT GTAATAAGAA ATGCAAGAAA ACTTGGTATA
GAAAGTCCCC TCGAACCAAG TCTTGCTCTT GCCCTTGGCA CTTCTGGAGT TACCTTATAT
GAATTGGTAA GAGCCTATTC TGGATTTGCA AATGGTGGGA ACAGGATAAC CCCAATAGCT
ATTTTAAGGG TTGAAGATTC AAAGGGAAAT ATTTTATATA ACAGTGCCCC AGAACTTACC
CCAGTAATAG AGAAGGATGT GATAGCAACT CTTGTTAAAA TGATGAAAAG AGTGATCACT
AATGGTACTG GAACCAGAGC GAATATTGGA AGGCCTGCTG CAGGTAAAAC AGGAACTACG
GATGATTACA GAGATGCTTG GTTTATTGGT TTTACTCCTG ATCTTTGCGC TGGAATTTGG
ATGGGTAATG ACGATTATAC CCCAACTAAC AAGGTTCCTG GAGGATTACT GCCCGCTATG
ACTTGGAAGG AATTCATGCA AAATGCTTTG AAAAATATAC CACCAAGAGA TTTTGACTTT
CTCATAGAGT CTCAACCTAT CCCTCAGGAA CAAACTCAAA AAGAAGAGAC TCAAACAGAA
ACCTATACTC TAACCTACAC CCAATAA
 
Protein sequence
MKNKYVKEIK ISGNKKRKNF IYVLLGIFSF ILILLVGVSI YVLTVIRDIP PIDRWVEIKP 
SQTTIIYSID NKILGRLYKE NRIYVPLYKI SPYLQQAVVV SEDKEFYTHS GVSIRGLVRA
ILVDLLHLEK KQGGSTITQQ VAELLFLSPE RTINKKIKKI YIATKLEKYF TKQQILEMYL
NLIYWGHGNY GAEAASQYYF GKSASDLTIP ESALLAAIIP APELLSPYKN PDKALMLRNI
VIEKLYQEGY INQADYEKSI KAPLGIIKRD DDSPQAKNIA PYFFDYVLKE LINKFGKDMV
YSGGLKVYTT LDTNLQSYAE ASLKKIIEQY GKKYKVSQGA LLAIDPNTGY IKAWVGGIDY
SKSQFDRVSM AVRQPGSAFK PFVYLTAIQK GFKPYDLIEE KEVTYTFNKK IWKPKNYDGK
LHGTITLQEA LENSYNLATI LLLEEVGVGD VIRNARKLGI ESPLEPSLAL ALGTSGVTLY
ELVRAYSGFA NGGNRITPIA ILRVEDSKGN ILYNSAPELT PVIEKDVIAT LVKMMKRVIT
NGTGTRANIG RPAAGKTGTT DDYRDAWFIG FTPDLCAGIW MGNDDYTPTN KVPGGLLPAM
TWKEFMQNAL KNIPPRDFDF LIESQPIPQE QTQKEETQTE TYTLTYTQ